Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 KRT8P30-201ENST00000432100 650 ntBASIC23.67■■□□□ 1.38
CHD1O14646 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC23.67■■□□□ 1.38
CHD1O14646 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CHD1O14646 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHD1O14646 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHD1O14646 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHD1O14646 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC23.67■■□□□ 1.38
CHD1O14646 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CHD1O14646 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC23.67■■□□□ 1.38
CHD1O14646 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHD1O14646 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHD1O14646 CCL25-202ENST00000315626 450 ntTSL 2 BASIC23.67■■□□□ 1.38
CHD1O14646 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC23.67■■□□□ 1.38
CHD1O14646 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC23.67■■□□□ 1.38
CHD1O14646 HNRNPA1P2-207ENST00000432375 960 ntBASIC23.67■■□□□ 1.38
CHD1O14646 PFN2-212ENST00000490975 858 ntTSL 4 BASIC23.67■■□□□ 1.38
CHD1O14646 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC23.67■■□□□ 1.38
CHD1O14646 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC23.67■■□□□ 1.38
CHD1O14646 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC23.67■■□□□ 1.38
CHD1O14646 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC23.67■■□□□ 1.38
CHD1O14646 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC23.67■■□□□ 1.38
CHD1O14646 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHD1O14646 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHD1O14646 AC092127.1-201ENST00000567093 3455 ntBASIC23.66■■□□□ 1.38
CHD1O14646 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHD1O14646 AC022080.1-201ENST00000366255 781 ntBASIC23.66■■□□□ 1.38
CHD1O14646 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
CHD1O14646 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CHD1O14646 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC23.66■■□□□ 1.38
CHD1O14646 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC23.66■■□□□ 1.38
CHD1O14646 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC23.66■■□□□ 1.38
CHD1O14646 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC23.66■■□□□ 1.38
CHD1O14646 KLF17P1-201ENST00000547105 1126 ntBASIC23.66■■□□□ 1.38
CHD1O14646 HNRNPA1P16-201ENST00000575692 955 ntBASIC23.66■■□□□ 1.38
CHD1O14646 DRG2-220ENST00000583355 891 ntTSL 3 BASIC23.66■■□□□ 1.38
CHD1O14646 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC23.66■■□□□ 1.38
CHD1O14646 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
CHD1O14646 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC23.66■■□□□ 1.38
CHD1O14646 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CHD1O14646 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC23.66■■□□□ 1.38
CHD1O14646 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
CHD1O14646 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHD1O14646 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC23.66■■□□□ 1.38
CHD1O14646 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC23.66■■□□□ 1.38
CHD1O14646 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CHD1O14646 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CHD1O14646 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC23.65■■□□□ 1.38
CHD1O14646 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC23.65■■□□□ 1.38
CHD1O14646 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CHD1O14646 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHD1O14646 AP000354.1-201ENST00000396982 456 ntBASIC23.65■■□□□ 1.38
CHD1O14646 NRADDP-201ENST00000437305 691 ntBASIC23.65■■□□□ 1.38
CHD1O14646 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC23.65■■□□□ 1.38
CHD1O14646 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC23.65■■□□□ 1.38
CHD1O14646 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC23.65■■□□□ 1.38
CHD1O14646 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC23.65■■□□□ 1.38
CHD1O14646 PRMT1P1-201ENST00000604252 1009 ntBASIC23.65■■□□□ 1.38
CHD1O14646 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC23.65■■□□□ 1.38
CHD1O14646 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CHD1O14646 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CHD1O14646 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHD1O14646 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
CHD1O14646 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHD1O14646 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHD1O14646 PCDHB19P-201ENST00000570871 2371 ntBASIC23.65■■□□□ 1.38
CHD1O14646 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CHD1O14646 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHD1O14646 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHD1O14646 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC23.65■■□□□ 1.38
CHD1O14646 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHD1O14646 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC23.65■■□□□ 1.38
CHD1O14646 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC23.65■■□□□ 1.38
CHD1O14646 PGAM1P11-201ENST00000416729 680 ntBASIC23.64■■□□□ 1.38
CHD1O14646 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.38
CHD1O14646 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC23.64■■□□□ 1.38
CHD1O14646 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CHD1O14646 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
CHD1O14646 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
CHD1O14646 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC23.64■■□□□ 1.38
CHD1O14646 AC019109.1-201ENST00000401725 1874 ntBASIC23.64■■□□□ 1.38
CHD1O14646 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CHD1O14646 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CHD1O14646 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHD1O14646 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC23.64■■□□□ 1.37
CHD1O14646 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC23.64■■□□□ 1.37
CHD1O14646 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CHD1O14646 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHD1O14646 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHD1O14646 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC23.64■■□□□ 1.37
CHD1O14646 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC23.64■■□□□ 1.37
CHD1O14646 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC23.64■■□□□ 1.37
CHD1O14646 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC23.64■■□□□ 1.37
CHD1O14646 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC23.64■■□□□ 1.37
CHD1O14646 AC006116.2-201ENST00000589958 988 ntBASIC23.64■■□□□ 1.37
CHD1O14646 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
CHD1O14646 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
CHD1O14646 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC23.63■■□□□ 1.37
CHD1O14646 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHD1O14646 STK33-217ENST00000534493 1895 ntTSL 2 BASIC23.63■■□□□ 1.37
CHD1O14646 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms