Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.05
SLC28A1O00337 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
SLC28A1O00337 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.71□□□□□ -0.05
SLC28A1O00337 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SLC28A1O00337 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.71□□□□□ -0.05
SLC28A1O00337 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SLC28A1O00337 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC28A1O00337 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC28A1O00337 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC28A1O00337 GRK6P1-201ENST00000400595 1711 ntBASIC14.71□□□□□ -0.05
SLC28A1O00337 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SLC28A1O00337 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SLC28A1O00337 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SLC28A1O00337 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.71□□□□□ -0.06
SLC28A1O00337 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.71□□□□□ -0.06
SLC28A1O00337 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.71□□□□□ -0.06
SLC28A1O00337 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SLC28A1O00337 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SLC28A1O00337 BTBD7P1-201ENST00000447253 1453 ntBASIC14.7□□□□□ -0.06
SLC28A1O00337 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SLC28A1O00337 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SLC28A1O00337 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SLC28A1O00337 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.7□□□□□ -0.06
SLC28A1O00337 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SLC28A1O00337 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
SLC28A1O00337 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC28A1O00337 MIR1233-2-201ENST00000408138 82 ntBASIC14.7□□□□□ -0.06
SLC28A1O00337 MIR1233-1-201ENST00000408722 82 ntBASIC14.7□□□□□ -0.06
SLC28A1O00337 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.7□□□□□ -0.06
SLC28A1O00337 TREML5P-201ENST00000421694 576 ntBASIC14.7□□□□□ -0.06
SLC28A1O00337 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.7□□□□□ -0.06
SLC28A1O00337 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.7□□□□□ -0.06
SLC28A1O00337 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC28A1O00337 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.7□□□□□ -0.06
SLC28A1O00337 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 AL158212.4-201ENST00000624062 1286 ntBASIC14.7□□□□□ -0.06
SLC28A1O00337 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SLC28A1O00337 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC28A1O00337 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SLC28A1O00337 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.7□□□□□ -0.06
SLC28A1O00337 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC28A1O00337 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SLC28A1O00337 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SLC28A1O00337 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC28A1O00337 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A1O00337 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC28A1O00337 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A1O00337 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
SLC28A1O00337 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.69□□□□□ -0.06
SLC28A1O00337 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC28A1O00337 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC28A1O00337 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SLC28A1O00337 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A1O00337 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A1O00337 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
SLC28A1O00337 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A1O00337 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC28A1O00337 AC241585.1-201ENST00000433527 519 ntBASIC14.69□□□□□ -0.06
SLC28A1O00337 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.69□□□□□ -0.06
SLC28A1O00337 GAPDHP40-201ENST00000505218 1006 ntBASIC14.69□□□□□ -0.06
SLC28A1O00337 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SLC28A1O00337 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.69□□□□□ -0.06
SLC28A1O00337 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.69□□□□□ -0.06
SLC28A1O00337 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.69□□□□□ -0.06
SLC28A1O00337 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.69□□□□□ -0.06
SLC28A1O00337 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A1O00337 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A1O00337 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SLC28A1O00337 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
SLC28A1O00337 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A1O00337 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A1O00337 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SLC28A1O00337 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SLC28A1O00337 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
SLC28A1O00337 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A1O00337 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SLC28A1O00337 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms