Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CDC7O00311 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CDC7O00311 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.97□□□□□ -0.01
CDC7O00311 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CDC7O00311 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.97□□□□□ -0.01
CDC7O00311 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
CDC7O00311 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 HLA-K-203ENST00000430151 1046 ntBASIC14.97□□□□□ -0.01
CDC7O00311 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.97□□□□□ -0.01
CDC7O00311 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.97□□□□□ -0.01
CDC7O00311 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.97□□□□□ -0.01
CDC7O00311 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.97□□□□□ -0.01
CDC7O00311 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.97□□□□□ -0.01
CDC7O00311 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.97□□□□□ -0.01
CDC7O00311 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.97□□□□□ -0.01
CDC7O00311 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.97□□□□□ -0.01
CDC7O00311 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.97□□□□□ -0.01
CDC7O00311 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CDC7O00311 AC007191.1-201ENST00000623179 2995 ntBASIC14.97□□□□□ -0.01
CDC7O00311 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.97□□□□□ -0.01
CDC7O00311 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
CDC7O00311 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CDC7O00311 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
CDC7O00311 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CDC7O00311 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.97□□□□□ -0.01
CDC7O00311 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.97□□□□□ -0.01
CDC7O00311 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC7O00311 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.96□□□□□ -0.01
CDC7O00311 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC7O00311 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
CDC7O00311 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CDC7O00311 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC7O00311 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC7O00311 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CDC7O00311 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC7O00311 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.96□□□□□ -0.01
CDC7O00311 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC7O00311 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CDC7O00311 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC7O00311 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC7O00311 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC7O00311 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC7O00311 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CDC7O00311 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CDC7O00311 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC7O00311 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC7O00311 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDC7O00311 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC7O00311 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CDC7O00311 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.96□□□□□ -0.01
CDC7O00311 RNA5SP421-201ENST00000516864 134 ntBASIC14.96□□□□□ -0.01
CDC7O00311 BRI3BPP1-201ENST00000594224 787 ntBASIC14.96□□□□□ -0.01
CDC7O00311 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.96□□□□□ -0.01
CDC7O00311 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CDC7O00311 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.96□□□□□ -0.01
CDC7O00311 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC7O00311 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.96□□□□□ -0.01
CDC7O00311 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC7O00311 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC7O00311 AC015656.1-201ENST00000624209 3578 ntBASIC14.96□□□□□ -0.01
CDC7O00311 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC7O00311 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDC7O00311 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CDC7O00311 SLC7A15P-201ENST00000424028 1363 ntBASIC14.96□□□□□ -0.02
CDC7O00311 AC126755.1-201ENST00000525846 6405 ntBASIC14.96□□□□□ -0.02
CDC7O00311 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.96□□□□□ -0.02
CDC7O00311 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CDC7O00311 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.96□□□□□ -0.02
CDC7O00311 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CDC7O00311 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.96□□□□□ -0.02
CDC7O00311 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CDC7O00311 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC7O00311 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.95□□□□□ -0.02
CDC7O00311 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.95□□□□□ -0.02
CDC7O00311 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDC7O00311 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms