Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP99D6REC4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 AC040160.2-201ENST00000623816 1675 ntBASIC15.29■□□□□ 0.04
CFAP99D6REC4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP99D6REC4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP99D6REC4 AC023908.3-201ENST00000564211 3047 ntBASIC15.29■□□□□ 0.04
CFAP99D6REC4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP99D6REC4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP99D6REC4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP99D6REC4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP99D6REC4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP99D6REC4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP99D6REC4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 AC004066.1-201ENST00000502488 802 ntBASIC15.29■□□□□ 0.04
CFAP99D6REC4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 TP53TG3HP-202ENST00000569755 579 ntBASIC15.29■□□□□ 0.04
CFAP99D6REC4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 CHCHD2P3-201ENST00000603038 451 ntBASIC15.29■□□□□ 0.04
CFAP99D6REC4 AC093813.1-201ENST00000605066 256 ntBASIC15.29■□□□□ 0.04
CFAP99D6REC4 AC008494.3-201ENST00000606615 944 ntBASIC15.29■□□□□ 0.04
CFAP99D6REC4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP99D6REC4 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP99D6REC4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP99D6REC4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP99D6REC4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP99D6REC4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP99D6REC4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP99D6REC4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CFAP99D6REC4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.29■□□□□ 0.04
CFAP99D6REC4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CFAP99D6REC4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFAP99D6REC4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CFAP99D6REC4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.28■□□□□ 0.04
CFAP99D6REC4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CFAP99D6REC4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.28■□□□□ 0.04
CFAP99D6REC4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CFAP99D6REC4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CFAP99D6REC4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFAP99D6REC4 DRD5P1-201ENST00000456605 1438 ntBASIC15.28■□□□□ 0.04
CFAP99D6REC4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFAP99D6REC4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFAP99D6REC4 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CFAP99D6REC4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFAP99D6REC4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFAP99D6REC4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFAP99D6REC4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.28■□□□□ 0.04
CFAP99D6REC4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFAP99D6REC4 AL035696.2-201ENST00000407941 709 ntBASIC15.28■□□□□ 0.04
CFAP99D6REC4 SOCS2P1-201ENST00000417727 557 ntBASIC15.28■□□□□ 0.04
CFAP99D6REC4 GHSR-202ENST00000427970 912 ntBASIC15.28■□□□□ 0.04
CFAP99D6REC4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CFAP99D6REC4 AC026410.3-201ENST00000514280 936 ntBASIC15.28■□□□□ 0.04
CFAP99D6REC4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CFAP99D6REC4 AC133539.2-201ENST00000604757 467 ntBASIC15.28■□□□□ 0.04
CFAP99D6REC4 AC107373.2-201ENST00000607735 490 ntBASIC15.28■□□□□ 0.04
CFAP99D6REC4 AL662799.1-202ENST00000614205 422 ntBASIC15.28■□□□□ 0.04
CFAP99D6REC4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CFAP99D6REC4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.28■□□□□ 0.04
CFAP99D6REC4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFAP99D6REC4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.28■□□□□ 0.04
CFAP99D6REC4 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CFAP99D6REC4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CFAP99D6REC4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CFAP99D6REC4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFAP99D6REC4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CFAP99D6REC4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.28■□□□□ 0.04
CFAP99D6REC4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFAP99D6REC4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFAP99D6REC4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CFAP99D6REC4 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CFAP99D6REC4 AC023157.3-201ENST00000619086 2088 ntBASIC15.28■□□□□ 0.04
CFAP99D6REC4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CFAP99D6REC4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CFAP99D6REC4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.27■□□□□ 0.04
CFAP99D6REC4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CFAP99D6REC4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
CFAP99D6REC4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CFAP99D6REC4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.27■□□□□ 0.04
CFAP99D6REC4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CFAP99D6REC4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CFAP99D6REC4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.27■□□□□ 0.04
CFAP99D6REC4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.27■□□□□ 0.04
CFAP99D6REC4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CFAP99D6REC4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms