Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.53■□□□□ 0.08
CAPN8A6NHC0 AL645728.2-202ENST00000641679 227 ntBASIC15.53■□□□□ 0.08
CAPN8A6NHC0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN8A6NHC0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN8A6NHC0 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPN8A6NHC0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPN8A6NHC0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN8A6NHC0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN8A6NHC0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN8A6NHC0 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.53■□□□□ 0.08
CAPN8A6NHC0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN8A6NHC0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CAPN8A6NHC0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN8A6NHC0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN8A6NHC0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPN8A6NHC0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 AC092933.1-201ENST00000393644 945 ntBASIC15.52■□□□□ 0.08
CAPN8A6NHC0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 INE1-201ENST00000456273 945 ntBASIC15.52■□□□□ 0.08
CAPN8A6NHC0 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 AL359711.2-201ENST00000563105 872 ntBASIC15.52■□□□□ 0.08
CAPN8A6NHC0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CAPN8A6NHC0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CAPN8A6NHC0 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.51■□□□□ 0.07
CAPN8A6NHC0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 C1QBPP1-201ENST00000400117 770 ntBASIC15.51■□□□□ 0.07
CAPN8A6NHC0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 SOCS2P1-201ENST00000417727 557 ntBASIC15.51■□□□□ 0.07
CAPN8A6NHC0 AC022210.1-201ENST00000449856 793 ntBASIC15.51■□□□□ 0.07
CAPN8A6NHC0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.51■□□□□ 0.07
CAPN8A6NHC0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms