Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 MESTP3-201ENST00000503460 968 ntBASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 AC026434.2-201ENST00000506094 1078 ntBASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 ACTG1P17-201ENST00000558391 1119 ntBASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 AL451050.2-201ENST00000606967 682 ntBASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 AP001002.3-201ENST00000623482 206 ntBASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 MST1L-201ENST00000442552 2185 ntBASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
TBC1D3BA6NDS4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 AL136309.1-201ENST00000403917 691 ntBASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 BX284668.4-201ENST00000453917 508 ntBASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 AP003171.2-201ENST00000528208 925 ntBASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3BA6NDS4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3BA6NDS4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TBC1D3BA6NDS4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3BA6NDS4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
TBC1D3BA6NDS4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TBC1D3BA6NDS4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3BA6NDS4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TBC1D3BA6NDS4 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3BA6NDS4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.39■□□□□ 0.05
TBC1D3BA6NDS4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3BA6NDS4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3BA6NDS4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3BA6NDS4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.39■□□□□ 0.05
TBC1D3BA6NDS4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms