Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 CICP8-201ENST00000455800 2813 ntBASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 MBLAC2-202ENST00000514906 1936 ntBASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 AP002472.1-201ENST00000577490 586 ntBASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 AL031008.1-201ENST00000619963 541 ntBASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 PEG13-201ENST00000631594 5667 ntBASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MEIS3P1A6NDR6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 FAM220BP-201ENST00000377689 816 ntBASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 GHSR-202ENST00000427970 912 ntBASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 AL135744.1-201ENST00000565098 629 ntBASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 AC064836.3-201ENST00000607928 673 ntBASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 AC005562.1-201ENST00000583030 3219 ntBASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MEIS3P1A6NDR6 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
MEIS3P1A6NDR6 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms