Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 AP001005.1-201ENST00000571755 1248 ntBASIC13.29□□□□□ -0.28
SHISA3A0PJX4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 AC084121.4-201ENST00000641598 221 ntBASIC13.29□□□□□ -0.28
SHISA3A0PJX4 AF228730.8-201ENST00000642140 221 ntBASIC13.29□□□□□ -0.28
SHISA3A0PJX4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 AC023794.5-201ENST00000564380 2157 ntBASIC13.29□□□□□ -0.28
SHISA3A0PJX4 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 AC018665.1-201ENST00000622927 1362 ntBASIC13.29□□□□□ -0.28
SHISA3A0PJX4 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.29□□□□□ -0.28
SHISA3A0PJX4 AC015818.8-201ENST00000587907 1519 ntBASIC13.29□□□□□ -0.28
SHISA3A0PJX4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.29□□□□□ -0.28
SHISA3A0PJX4 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 FAM90A12P-201ENST00000519497 2375 ntBASIC13.28□□□□□ -0.28
SHISA3A0PJX4 FAM90A24P-201ENST00000520792 2369 ntBASIC13.28□□□□□ -0.28
SHISA3A0PJX4 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 AC093909.1-201ENST00000504731 1122 ntBASIC13.28□□□□□ -0.28
SHISA3A0PJX4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.28□□□□□ -0.28
SHISA3A0PJX4 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 KRT8P22-201ENST00000562317 1415 ntBASIC13.28□□□□□ -0.28
SHISA3A0PJX4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SHISA3A0PJX4 ST20-AS1-201ENST00000560255 4223 ntBASIC13.28□□□□□ -0.28
SHISA3A0PJX4 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SHISA3A0PJX4 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SHISA3A0PJX4 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SHISA3A0PJX4 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SHISA3A0PJX4 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SHISA3A0PJX4 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SHISA3A0PJX4 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SHISA3A0PJX4 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SHISA3A0PJX4 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SHISA3A0PJX4 Z82170.1-201ENST00000625081 3192 ntBASIC13.27□□□□□ -0.28
SHISA3A0PJX4 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.27□□□□□ -0.28
SHISA3A0PJX4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms