Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 RPL17P45-201ENST00000586289 509 ntBASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC015909.3-201ENST00000572855 1794 ntBASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC090616.6-203ENST00000579186 1945 ntBASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LOC102724428A0A0B4J2F2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 AL592076.1-201ENST00000424448 303 ntBASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC079112.1-201ENST00000454972 939 ntBASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 NDUFS6P1-201ENST00000485187 316 ntBASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 LILRP1-201ENST00000444199 1370 ntBASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.04■□□□□ 0.64
LOC102724428A0A0B4J2F2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LOC102724428A0A0B4J2F2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LOC102724428A0A0B4J2F2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LOC102724428A0A0B4J2F2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.03■□□□□ 0.64
LOC102724428A0A0B4J2F2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LOC102724428A0A0B4J2F2 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LOC102724428A0A0B4J2F2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LOC102724428A0A0B4J2F2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LOC102724428A0A0B4J2F2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LOC102724428A0A0B4J2F2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LOC102724428A0A0B4J2F2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LOC102724428A0A0B4J2F2 SOD2-202ENST00000367054 815 ntTSL 2 BASIC19.03■□□□□ 0.64
LOC102724428A0A0B4J2F2 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC19.03■□□□□ 0.64
LOC102724428A0A0B4J2F2 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC19.03■□□□□ 0.64
LOC102724428A0A0B4J2F2 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC19.03■□□□□ 0.64
LOC102724428A0A0B4J2F2 DDX5-235ENST00000630471 473 ntTSL 4 BASIC19.03■□□□□ 0.64
LOC102724428A0A0B4J2F2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LOC102724428A0A0B4J2F2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LOC102724428A0A0B4J2F2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LOC102724428A0A0B4J2F2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
LOC102724428A0A0B4J2F2 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LOC102724428A0A0B4J2F2 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms