Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 AC063926.3-201ENST00000624734 5658 ntBASIC17.39■□□□□ 0.37
CLIC4Q9Y696 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 AC092183.1-201ENST00000469884 875 ntBASIC17.39■□□□□ 0.37
CLIC4Q9Y696 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLIC4Q9Y696 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLIC4Q9Y696 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 BRI3BPP1-201ENST00000594224 787 ntBASIC17.37■□□□□ 0.37
CLIC4Q9Y696 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CLIC4Q9Y696 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms