Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 BAATP1-201ENST00000412284 1225 ntBASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 AC011495.1-201ENST00000498085 584 ntBASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 AC026434.2-201ENST00000506094 1078 ntBASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGC3Q9UN70 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 RN7SL837P-201ENST00000463010 287 ntBASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 RN7SL752P-201ENST00000463779 287 ntBASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 PTP4A1P2-201ENST00000546033 454 ntBASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 AL596325.1-201ENST00000563991 1082 ntBASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 AC018529.2-202ENST00000611482 3087 ntBASIC16.03■□□□□ 0.16
PCDHGC3Q9UN70 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms