Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.08■□□□□ 0.65
SCN11AQ9UI33 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCN11AQ9UI33 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
SCN11AQ9UI33 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SCN11AQ9UI33 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SCN11AQ9UI33 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 AC239868.1-201ENST00000369385 493 ntBASIC19.08■□□□□ 0.64
SCN11AQ9UI33 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 HNRNPA1P27-201ENST00000412087 955 ntBASIC19.08■□□□□ 0.64
SCN11AQ9UI33 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 AL035414.1-201ENST00000451327 857 ntBASIC19.08■□□□□ 0.64
SCN11AQ9UI33 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 AC007881.3-201ENST00000608897 607 ntBASIC19.08■□□□□ 0.64
SCN11AQ9UI33 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC19.08■□□□□ 0.64
SCN11AQ9UI33 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 CICP23-201ENST00000605013 2741 ntBASIC19.07■□□□□ 0.64
SCN11AQ9UI33 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 SOD2-202ENST00000367054 815 ntTSL 2 BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 MPRIPP1-201ENST00000452433 1089 ntBASIC19.07■□□□□ 0.64
SCN11AQ9UI33 TMCO5B-205ENST00000530020 894 ntBASIC19.07■□□□□ 0.64
SCN11AQ9UI33 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 NAT9-220ENST00000582870 896 ntTSL 5 BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 AL353726.2-201ENST00000623259 884 ntBASIC19.07■□□□□ 0.64
SCN11AQ9UI33 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC19.07■□□□□ 0.64
SCN11AQ9UI33 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 PFN2-202ENST00000423691 911 ntTSL 2 BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 DUTP3-201ENST00000450025 415 ntBASIC19.06■□□□□ 0.64
SCN11AQ9UI33 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 CCNC-217ENST00000523985 958 ntTSL 2 BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 NEU3-205ENST00000531619 582 ntTSL 5 BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 MRPL37P1-201ENST00000592451 1337 ntBASIC19.06■□□□□ 0.64
SCN11AQ9UI33 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 WDR7-208ENST00000589935 544 ntTSL 4 BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 AC008894.3-201ENST00000624324 3103 ntBASIC19.06■□□□□ 0.64
SCN11AQ9UI33 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN11AQ9UI33 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC19.05■□□□□ 0.64
SCN11AQ9UI33 STK26-204ENST00000481105 1835 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms