Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.88■□□□□ 0.29
BLOC1S4Q9NUP1 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 AC140479.7-201ENST00000636301 2332 ntBASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 AC232323.1-201ENST00000540724 2099 ntBASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 LRRC59-203ENST00000576448 1531 ntBASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 TMEM14DP-201ENST00000422205 345 ntBASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 USP32P1-208ENST00000506594 1164 ntBASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 AC106760.1-201ENST00000508690 800 ntBASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 AP001889.1-201ENST00000525414 633 ntBASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 GNRHR2-203ENST00000581100 1187 ntBASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 AC145423.3-201ENST00000615987 467 ntBASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 AL603764.1-201ENST00000636452 321 ntBASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 AL138709.1-201ENST00000614840 1693 ntBASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BLOC1S4Q9NUP1 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 PTP4A1P2-201ENST00000546033 454 ntBASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 AC018665.1-201ENST00000622927 1362 ntBASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BLOC1S4Q9NUP1 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BLOC1S4Q9NUP1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms