Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CISHQ9NSE2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CISHQ9NSE2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.23■□□□□ 0.19
CISHQ9NSE2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CISHQ9NSE2 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.23■□□□□ 0.19
CISHQ9NSE2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.23■□□□□ 0.19
CISHQ9NSE2 CR383656.12-201ENST00000549567 513 ntBASIC16.23■□□□□ 0.19
CISHQ9NSE2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.23■□□□□ 0.19
CISHQ9NSE2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CISHQ9NSE2 AC008735.3-201ENST00000596646 500 ntBASIC16.23■□□□□ 0.19
CISHQ9NSE2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.23■□□□□ 0.19
CISHQ9NSE2 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.23■□□□□ 0.19
CISHQ9NSE2 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.23■□□□□ 0.19
CISHQ9NSE2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CISHQ9NSE2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.23■□□□□ 0.19
CISHQ9NSE2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CISHQ9NSE2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.23■□□□□ 0.19
CISHQ9NSE2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CISHQ9NSE2 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CISHQ9NSE2 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.23■□□□□ 0.19
CISHQ9NSE2 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CISHQ9NSE2 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CISHQ9NSE2 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CISHQ9NSE2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 KRT17P7-201ENST00000451704 1104 ntBASIC16.22■□□□□ 0.19
CISHQ9NSE2 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 GIMAP3P-201ENST00000495150 836 ntBASIC16.22■□□□□ 0.19
CISHQ9NSE2 USP32P1-208ENST00000506594 1164 ntBASIC16.22■□□□□ 0.19
CISHQ9NSE2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 AP001889.1-201ENST00000525414 633 ntBASIC16.22■□□□□ 0.19
CISHQ9NSE2 SLC25A47P1-201ENST00000531577 414 ntBASIC16.22■□□□□ 0.19
CISHQ9NSE2 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 AC055811.4-201ENST00000624039 1754 ntBASIC16.22■□□□□ 0.19
CISHQ9NSE2 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CISHQ9NSE2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.22■□□□□ 0.19
CISHQ9NSE2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CISHQ9NSE2 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.21■□□□□ 0.19
CISHQ9NSE2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CISHQ9NSE2 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CISHQ9NSE2 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CISHQ9NSE2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CISHQ9NSE2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CISHQ9NSE2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CISHQ9NSE2 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CISHQ9NSE2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CISHQ9NSE2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.21■□□□□ 0.19
CISHQ9NSE2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CISHQ9NSE2 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CISHQ9NSE2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CISHQ9NSE2 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CISHQ9NSE2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.21■□□□□ 0.19
CISHQ9NSE2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.21■□□□□ 0.19
CISHQ9NSE2 AC106760.1-201ENST00000508690 800 ntBASIC16.21■□□□□ 0.19
CISHQ9NSE2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.21■□□□□ 0.19
CISHQ9NSE2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.21■□□□□ 0.19
CISHQ9NSE2 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.21■□□□□ 0.19
CISHQ9NSE2 AC145423.3-201ENST00000615987 467 ntBASIC16.21■□□□□ 0.19
CISHQ9NSE2 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.21■□□□□ 0.19
CISHQ9NSE2 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms