Protein–RNA interactions for Protein: Q9NPB8

GPCPD1, Glycerophosphocholine phosphodiesterase GPCPD1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1Q9NPB8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 MIR1908-201ENST00000410394 80 ntBASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 POM121L8P-201ENST00000417732 1281 ntBASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 POM121L9P-203ENST00000441984 1285 ntBASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 RPL13AP20-201ENST00000459725 609 ntBASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 DUX4L47-201ENST00000566374 394 ntBASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 MIR4741-201ENST00000579822 90 ntBASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 MIR4538-201ENST00000581377 78 ntBASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.62■□□□□ 0.41
GPCPD1Q9NPB8 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 NORAD-201ENST00000565493 5339 ntBASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 REXO1L2P-201ENST00000425429 2069 ntBASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 RN7SL219P-201ENST00000582872 296 ntBASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.61■□□□□ 0.41
GPCPD1Q9NPB8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 AL355994.2-201ENST00000447882 704 ntBASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GPCPD1Q9NPB8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms