Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 LINC02560-201ENST00000596379 459 ntBASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 AC008761.3-201ENST00000624803 892 ntBASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 AC232323.1-201ENST00000540724 2099 ntBASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 REXO1L5P-201ENST00000622260 2098 ntBASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.46□□□□□ -0.09
NEUROD4Q9HD90 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NEUROD4Q9HD90 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NEUROD4Q9HD90 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NEUROD4Q9HD90 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NEUROD4Q9HD90 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NEUROD4Q9HD90 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.46□□□□□ -0.1
NEUROD4Q9HD90 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.46□□□□□ -0.1
NEUROD4Q9HD90 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 AC004066.1-201ENST00000502488 802 ntBASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 AC036164.1-201ENST00000570544 333 ntBASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 AL391069.4-201ENST00000609583 481 ntBASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 AL390754.1-201ENST00000619088 582 ntBASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NEUROD4Q9HD90 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NEUROD4Q9HD90 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms