Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX8Q9HC52 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX8Q9HC52 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC17.06■□□□□ 0.32
CBX8Q9HC52 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CBX8Q9HC52 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX8Q9HC52 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC17.06■□□□□ 0.32
CBX8Q9HC52 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CBX8Q9HC52 Z97205.2-201ENST00000564697 1639 ntBASIC17.06■□□□□ 0.32
CBX8Q9HC52 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CBX8Q9HC52 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX8Q9HC52 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.06■□□□□ 0.32
CBX8Q9HC52 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX8Q9HC52 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CBX8Q9HC52 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC17.05■□□□□ 0.32
CBX8Q9HC52 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC17.05■□□□□ 0.32
CBX8Q9HC52 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX8Q9HC52 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX8Q9HC52 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CBX8Q9HC52 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX8Q9HC52 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC17.05■□□□□ 0.32
CBX8Q9HC52 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX8Q9HC52 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.05■□□□□ 0.32
CBX8Q9HC52 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CBX8Q9HC52 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX8Q9HC52 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX8Q9HC52 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.05■□□□□ 0.32
CBX8Q9HC52 AC022447.6-201ENST00000515522 438 ntBASIC17.05■□□□□ 0.32
CBX8Q9HC52 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX8Q9HC52 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CBX8Q9HC52 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX8Q9HC52 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.05■□□□□ 0.32
CBX8Q9HC52 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CBX8Q9HC52 FAM197Y3-203ENST00000618346 717 ntBASIC17.05■□□□□ 0.32
CBX8Q9HC52 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CBX8Q9HC52 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX8Q9HC52 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX8Q9HC52 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX8Q9HC52 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX8Q9HC52 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CBX8Q9HC52 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.05■□□□□ 0.32
CBX8Q9HC52 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CBX8Q9HC52 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX8Q9HC52 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CBX8Q9HC52 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CBX8Q9HC52 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX8Q9HC52 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX8Q9HC52 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CBX8Q9HC52 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CBX8Q9HC52 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CBX8Q9HC52 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX8Q9HC52 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.04■□□□□ 0.32
CBX8Q9HC52 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC17.04■□□□□ 0.32
CBX8Q9HC52 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CBX8Q9HC52 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.04■□□□□ 0.32
CBX8Q9HC52 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX8Q9HC52 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CBX8Q9HC52 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC17.04■□□□□ 0.32
CBX8Q9HC52 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX8Q9HC52 YBX2P1-201ENST00000394192 760 ntBASIC17.04■□□□□ 0.32
CBX8Q9HC52 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.04■□□□□ 0.32
CBX8Q9HC52 FAM58DP-201ENST00000428076 619 ntBASIC17.04■□□□□ 0.32
CBX8Q9HC52 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
CBX8Q9HC52 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.04■□□□□ 0.32
CBX8Q9HC52 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX8Q9HC52 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.04■□□□□ 0.32
CBX8Q9HC52 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX8Q9HC52 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.04■□□□□ 0.32
CBX8Q9HC52 AC003101.2-201ENST00000612557 442 ntBASIC17.04■□□□□ 0.32
CBX8Q9HC52 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC17.04■□□□□ 0.32
CBX8Q9HC52 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC17.04■□□□□ 0.32
CBX8Q9HC52 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.04■□□□□ 0.32
CBX8Q9HC52 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX8Q9HC52 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX8Q9HC52 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CBX8Q9HC52 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX8Q9HC52 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CBX8Q9HC52 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX8Q9HC52 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX8Q9HC52 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX8Q9HC52 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC17.04■□□□□ 0.32
CBX8Q9HC52 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CBX8Q9HC52 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CBX8Q9HC52 AL365209.1-201ENST00000624418 6473 ntBASIC17.03■□□□□ 0.32
CBX8Q9HC52 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CBX8Q9HC52 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.03■□□□□ 0.32
CBX8Q9HC52 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.03■□□□□ 0.32
CBX8Q9HC52 AL121723.1-201ENST00000445194 1519 ntBASIC17.03■□□□□ 0.32
CBX8Q9HC52 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC17.03■□□□□ 0.32
CBX8Q9HC52 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CBX8Q9HC52 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CBX8Q9HC52 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms