Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 DFFBP1-201ENST00000433250 979 ntBASIC14.58□□□□□ -0.08
BRF2Q9HAW0 GNAQP1-201ENST00000444815 1067 ntBASIC14.58□□□□□ -0.08
BRF2Q9HAW0 SPTLC1P1-201ENST00000447199 261 ntBASIC14.58□□□□□ -0.08
BRF2Q9HAW0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 AC120045.2-201ENST00000567334 178 ntBASIC14.58□□□□□ -0.08
BRF2Q9HAW0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 AC093726.1-201ENST00000608064 963 ntBASIC14.58□□□□□ -0.08
BRF2Q9HAW0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 AC140479.7-201ENST00000636301 2332 ntBASIC14.58□□□□□ -0.08
BRF2Q9HAW0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.58□□□□□ -0.08
BRF2Q9HAW0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 AC018529.2-202ENST00000611482 3087 ntBASIC14.57□□□□□ -0.08
BRF2Q9HAW0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms