Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 AC126915.1-201ENST00000522847 1038 ntBASIC15.84■□□□□ 0.13
LRRC3Q9BY71 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRC3Q9BY71 ACTG1P17-201ENST00000558391 1119 ntBASIC15.84■□□□□ 0.13
LRRC3Q9BY71 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LRRC3Q9BY71 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
LRRC3Q9BY71 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.84■□□□□ 0.13
LRRC3Q9BY71 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC3Q9BY71 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LRRC3Q9BY71 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
LRRC3Q9BY71 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC3Q9BY71 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC3Q9BY71 CICP11-201ENST00000434745 2827 ntBASIC15.84■□□□□ 0.13
LRRC3Q9BY71 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC3Q9BY71 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
LRRC3Q9BY71 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.84■□□□□ 0.13
LRRC3Q9BY71 KRT8P4-201ENST00000509735 1454 ntBASIC15.84■□□□□ 0.13
LRRC3Q9BY71 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRC3Q9BY71 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
LRRC3Q9BY71 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LRRC3Q9BY71 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LRRC3Q9BY71 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.83■□□□□ 0.13
LRRC3Q9BY71 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRC3Q9BY71 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRC3Q9BY71 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 AL513477.1-201ENST00000602865 2407 ntBASIC15.83■□□□□ 0.12
LRRC3Q9BY71 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.83■□□□□ 0.12
LRRC3Q9BY71 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.83■□□□□ 0.12
LRRC3Q9BY71 FNTAP2-201ENST00000430308 634 ntBASIC15.83■□□□□ 0.12
LRRC3Q9BY71 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 HIST2H2BC-201ENST00000498492 580 ntBASIC15.83■□□□□ 0.12
LRRC3Q9BY71 FTLP10-202ENST00000505798 471 ntBASIC15.83■□□□□ 0.12
LRRC3Q9BY71 AC100850.1-201ENST00000506768 649 ntBASIC15.83■□□□□ 0.12
LRRC3Q9BY71 SCARNA20.5-201ENST00000516991 142 ntBASIC15.83■□□□□ 0.12
LRRC3Q9BY71 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 AL451050.2-201ENST00000606967 682 ntBASIC15.83■□□□□ 0.12
LRRC3Q9BY71 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 AP001002.3-201ENST00000623482 206 ntBASIC15.83■□□□□ 0.12
LRRC3Q9BY71 AC068587.10-201ENST00000641210 219 ntBASIC15.83■□□□□ 0.12
LRRC3Q9BY71 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LRRC3Q9BY71 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.82■□□□□ 0.12
LRRC3Q9BY71 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.82■□□□□ 0.12
LRRC3Q9BY71 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRC3Q9BY71 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms