Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RSPO3Q9BXY4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 SPTLC1P1-201ENST00000447199 261 ntBASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 AC026434.2-201ENST00000506094 1078 ntBASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 AC036164.1-201ENST00000570544 333 ntBASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 AC124283.3-201ENST00000570869 594 ntBASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 AC004466.1-201ENST00000599515 1080 ntBASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.94□□□□□ -0.18
RSPO3Q9BXY4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 RNU1-114P-201ENST00000365297 166 ntBASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 AL645937.2-201ENST00000396808 931 ntBASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 EIF3FP3-201ENST00000434851 1086 ntBASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 AC012617.1-204ENST00000586340 2305 ntBASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 SLC7A15P-201ENST00000424028 1363 ntBASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RSPO3Q9BXY4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms