Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC010491.1-201ENST00000563101 2797 ntBASIC13.81□□□□□ -0.2
USB1Q9BQ65 AC005840.4-201ENST00000541242 2494 ntBASIC13.81□□□□□ -0.2
USB1Q9BQ65 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.81□□□□□ -0.2
USB1Q9BQ65 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.81□□□□□ -0.2
USB1Q9BQ65 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.81□□□□□ -0.2
USB1Q9BQ65 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC13.81□□□□□ -0.2
USB1Q9BQ65 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC13.81□□□□□ -0.2
USB1Q9BQ65 SPDYE18-201ENST00000510091 1050 ntBASIC13.81□□□□□ -0.2
USB1Q9BQ65 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
USB1Q9BQ65 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.81□□□□□ -0.2
USB1Q9BQ65 AC115102.1-201ENST00000558044 487 ntTSL 5 BASIC13.81□□□□□ -0.2
USB1Q9BQ65 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.81□□□□□ -0.2
USB1Q9BQ65 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC13.81□□□□□ -0.2
USB1Q9BQ65 AC007431.3-201ENST00000623221 587 ntBASIC13.81□□□□□ -0.2
USB1Q9BQ65 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.81□□□□□ -0.2
USB1Q9BQ65 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.81□□□□□ -0.2
USB1Q9BQ65 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.81□□□□□ -0.2
USB1Q9BQ65 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.81□□□□□ -0.2
USB1Q9BQ65 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
USB1Q9BQ65 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.81□□□□□ -0.2
USB1Q9BQ65 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
USB1Q9BQ65 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
USB1Q9BQ65 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
USB1Q9BQ65 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
USB1Q9BQ65 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
USB1Q9BQ65 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
USB1Q9BQ65 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
USB1Q9BQ65 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
USB1Q9BQ65 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
USB1Q9BQ65 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
USB1Q9BQ65 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
USB1Q9BQ65 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
USB1Q9BQ65 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 CHCHD2P3-201ENST00000603038 451 ntBASIC13.8□□□□□ -0.2
USB1Q9BQ65 AC008494.3-201ENST00000606615 944 ntBASIC13.8□□□□□ -0.2
USB1Q9BQ65 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
USB1Q9BQ65 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
USB1Q9BQ65 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
USB1Q9BQ65 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
USB1Q9BQ65 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
USB1Q9BQ65 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
USB1Q9BQ65 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
USB1Q9BQ65 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
USB1Q9BQ65 AC134407.2-201ENST00000625089 1978 ntBASIC13.8□□□□□ -0.2
USB1Q9BQ65 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
USB1Q9BQ65 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
USB1Q9BQ65 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.8□□□□□ -0.2
USB1Q9BQ65 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
USB1Q9BQ65 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
USB1Q9BQ65 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms