Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB40CQ96S21 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB40CQ96S21 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB40CQ96S21 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB40CQ96S21 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB40CQ96S21 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB40CQ96S21 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB40CQ96S21 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.43□□□□□ -0.42
RAB40CQ96S21 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB40CQ96S21 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB40CQ96S21 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB40CQ96S21 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 AC074386.1-202ENST00000463561 864 ntBASIC12.43□□□□□ -0.42
RAB40CQ96S21 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 SLC25A1P1-201ENST00000528351 927 ntBASIC12.43□□□□□ -0.42
RAB40CQ96S21 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 AP002472.1-201ENST00000577490 586 ntBASIC12.43□□□□□ -0.42
RAB40CQ96S21 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB40CQ96S21 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB40CQ96S21 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB40CQ96S21 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB40CQ96S21 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RAB40CQ96S21 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RAB40CQ96S21 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RAB40CQ96S21 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 AC011474.4-201ENST00000623523 2076 ntBASIC12.42□□□□□ -0.42
RAB40CQ96S21 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 AL591424.1-201ENST00000442569 1213 ntBASIC12.42□□□□□ -0.42
RAB40CQ96S21 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 RNA5SP416-201ENST00000516838 111 ntBASIC12.42□□□□□ -0.42
RAB40CQ96S21 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 AC099522.2-201ENST00000607001 744 ntBASIC12.42□□□□□ -0.42
RAB40CQ96S21 AC027601.4-201ENST00000611259 610 ntBASIC12.42□□□□□ -0.42
RAB40CQ96S21 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 REXO1L4P-201ENST00000605109 1937 ntBASIC12.42□□□□□ -0.42
RAB40CQ96S21 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.42□□□□□ -0.42
RAB40CQ96S21 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RAB40CQ96S21 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 217.5 ms