Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.46□□□□□ -0.1
NSMCE2Q96MF7 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NSMCE2Q96MF7 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NSMCE2Q96MF7 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
NSMCE2Q96MF7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NSMCE2Q96MF7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
NSMCE2Q96MF7 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.46□□□□□ -0.1
NSMCE2Q96MF7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
NSMCE2Q96MF7 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
NSMCE2Q96MF7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.46□□□□□ -0.1
NSMCE2Q96MF7 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.46□□□□□ -0.1
NSMCE2Q96MF7 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
NSMCE2Q96MF7 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NSMCE2Q96MF7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 AL662844.1-201ENST00000546340 181 ntBASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 RARRES2P9-201ENST00000565168 469 ntBASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 AC026120.1-201ENST00000611536 926 ntBASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 AL645728.2-202ENST00000641679 227 ntBASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NSMCE2Q96MF7 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 AC079781.5-202ENST00000641784 3743 ntBASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 AL353705.2-201ENST00000428243 662 ntBASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 ADH5P3-201ENST00000433842 1137 ntBASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 HIST3H2BA-201ENST00000436555 524 ntBASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 AC079140.1-201ENST00000508039 487 ntBASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.44□□□□□ -0.1
NSMCE2Q96MF7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms