Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC21.12■□□□□ 0.97
CCDC7Q96M83 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC7Q96M83 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CCDC7Q96M83 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC7Q96M83 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
CCDC7Q96M83 USP35-204ENST00000530267 2419 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC7Q96M83 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC7Q96M83 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC21.12■□□□□ 0.97
CCDC7Q96M83 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC7Q96M83 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC7Q96M83 COCH-203ENST00000460581 2688 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC7Q96M83 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC7Q96M83 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC7Q96M83 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC7Q96M83 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC7Q96M83 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC7Q96M83 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC7Q96M83 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC7Q96M83 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CCDC7Q96M83 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC7Q96M83 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC7Q96M83 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC7Q96M83 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC7Q96M83 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC7Q96M83 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC7Q96M83 AC093433.1-201ENST00000458048 571 ntBASIC21.11■□□□□ 0.97
CCDC7Q96M83 FTH1P14-201ENST00000482930 551 ntBASIC21.11■□□□□ 0.97
CCDC7Q96M83 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC7Q96M83 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC7Q96M83 AP001063.1-201ENST00000568332 529 ntBASIC21.11■□□□□ 0.97
CCDC7Q96M83 AC009486.1-201ENST00000569860 813 ntBASIC21.11■□□□□ 0.97
CCDC7Q96M83 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC7Q96M83 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CCDC7Q96M83 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CCDC7Q96M83 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC7Q96M83 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC7Q96M83 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC7Q96M83 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC7Q96M83 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC7Q96M83 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC7Q96M83 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC7Q96M83 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
CCDC7Q96M83 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
CCDC7Q96M83 AC018442.1-201ENST00000421439 2061 ntBASIC21.11■□□□□ 0.97
CCDC7Q96M83 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC7Q96M83 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CCDC7Q96M83 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC7Q96M83 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC7Q96M83 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC7Q96M83 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CCDC7Q96M83 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CCDC7Q96M83 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CCDC7Q96M83 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC7Q96M83 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC7Q96M83 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC7Q96M83 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC7Q96M83 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC21.11■□□□□ 0.97
CCDC7Q96M83 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC7Q96M83 YBX1P6-201ENST00000442962 1002 ntBASIC21.1■□□□□ 0.97
CCDC7Q96M83 PFN1P12-201ENST00000455938 534 ntBASIC21.1■□□□□ 0.97
CCDC7Q96M83 AC007551.1-201ENST00000457394 519 ntBASIC21.1■□□□□ 0.97
CCDC7Q96M83 AC026434.2-201ENST00000506094 1078 ntBASIC21.1■□□□□ 0.97
CCDC7Q96M83 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC7Q96M83 AC079316.1-201ENST00000548397 411 ntBASIC21.1■□□□□ 0.97
CCDC7Q96M83 AP005019.2-201ENST00000615104 511 ntBASIC21.1■□□□□ 0.97
CCDC7Q96M83 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC7Q96M83 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC7Q96M83 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC7Q96M83 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC7Q96M83 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC7Q96M83 AC018529.2-202ENST00000611482 3087 ntBASIC21.1■□□□□ 0.97
CCDC7Q96M83 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC7Q96M83 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC7Q96M83 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC7Q96M83 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC7Q96M83 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC7Q96M83 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC7Q96M83 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC7Q96M83 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC7Q96M83 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CCDC7Q96M83 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC7Q96M83 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC7Q96M83 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC7Q96M83 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC7Q96M83 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC7Q96M83 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC7Q96M83 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC7Q96M83 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC7Q96M83 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC7Q96M83 AC012441.1-201ENST00000446669 685 ntBASIC21.1■□□□□ 0.97
CCDC7Q96M83 EMC4-209ENST00000559421 497 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC7Q96M83 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CCDC7Q96M83 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC7Q96M83 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC7Q96M83 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC7Q96M83 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC7Q96M83 LINC00552-201ENST00000625151 2579 ntBASIC21.09■□□□□ 0.97
CCDC7Q96M83 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC7Q96M83 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC7Q96M83 FAM45BP-202ENST00000592932 1624 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms