Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 AC113367.3-201ENST00000508316 1912 ntBASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 BCRP1-201ENST00000444246 691 ntBASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 AP001582.1-201ENST00000525856 295 ntBASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.86□□□□□ -0.03
PDLIM5Q96HC4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 AC005912.2-201ENST00000619492 2400 ntBASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 KLF2P2-201ENST00000416807 1039 ntBASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 ELK1P1-201ENST00000485699 580 ntBASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 GIMAP3P-201ENST00000495150 836 ntBASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDLIM5Q96HC4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms