Protein–RNA interactions for Protein: Q96DX7

TRIM44, Tripartite motif-containing protein 44, humanhuman

Predicted RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44Q96DX7 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM44Q96DX7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM44Q96DX7 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM44Q96DX7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM44Q96DX7 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM44Q96DX7 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
TRIM44Q96DX7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM44Q96DX7 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TRIM44Q96DX7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRIM44Q96DX7 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM44Q96DX7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM44Q96DX7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM44Q96DX7 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM44Q96DX7 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 AL645929.1-201ENST00000420084 975 ntBASIC17.3■□□□□ 0.36
TRIM44Q96DX7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 GGTLC5P-201ENST00000617623 998 ntBASIC17.3■□□□□ 0.36
TRIM44Q96DX7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 AL589182.2-201ENST00000619332 1049 ntBASIC17.3■□□□□ 0.36
TRIM44Q96DX7 HYMAI.1-201ENST00000620949 238 ntBASIC17.3■□□□□ 0.36
TRIM44Q96DX7 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 FAM90A12P-201ENST00000519497 2375 ntBASIC17.3■□□□□ 0.36
TRIM44Q96DX7 FAM90A24P-201ENST00000520792 2369 ntBASIC17.3■□□□□ 0.36
TRIM44Q96DX7 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM44Q96DX7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 BNIP3P1-202ENST00000550043 1585 ntBASIC17.29■□□□□ 0.36
TRIM44Q96DX7 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 YBX1P2-201ENST00000489612 999 ntBASIC17.29■□□□□ 0.36
TRIM44Q96DX7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 AL589702.1-201ENST00000641229 1509 ntBASIC17.29■□□□□ 0.36
TRIM44Q96DX7 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM44Q96DX7 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM44Q96DX7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM44Q96DX7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM44Q96DX7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM44Q96DX7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM44Q96DX7 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms