Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS33AQ96AX1 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 AC018442.1-201ENST00000421439 2061 ntBASIC14.72□□□□□ -0.05
VPS33AQ96AX1 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 AC006504.5-208ENST00000588784 2401 ntBASIC14.72□□□□□ -0.05
VPS33AQ96AX1 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 AC012508.2-201ENST00000567613 1472 ntBASIC14.72□□□□□ -0.05
VPS33AQ96AX1 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 AL627223.1-201ENST00000416693 442 ntBASIC14.72□□□□□ -0.05
VPS33AQ96AX1 GPS2P2-201ENST00000430745 888 ntBASIC14.72□□□□□ -0.05
VPS33AQ96AX1 RBPMS2P1-201ENST00000437762 623 ntBASIC14.72□□□□□ -0.05
VPS33AQ96AX1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 AC007967.4-201ENST00000614700 386 ntBASIC14.72□□□□□ -0.05
VPS33AQ96AX1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS33AQ96AX1 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 AC004461.1-201ENST00000412461 403 ntBASIC14.71□□□□□ -0.05
VPS33AQ96AX1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 SPDYE14P-201ENST00000442619 822 ntBASIC14.71□□□□□ -0.05
VPS33AQ96AX1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 AL671883.3-201ENST00000603274 991 ntBASIC14.71□□□□□ -0.05
VPS33AQ96AX1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 AL513210.1-201ENST00000629608 234 ntBASIC14.71□□□□□ -0.05
VPS33AQ96AX1 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS33AQ96AX1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms