Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.22■□□□□ 0.19
SHC3Q92529 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHC3Q92529 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHC3Q92529 ACKR1-201ENST00000368121 1240 ntBASIC16.22■□□□□ 0.19
SHC3Q92529 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SHC3Q92529 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHC3Q92529 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.22■□□□□ 0.19
SHC3Q92529 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.22■□□□□ 0.19
SHC3Q92529 EIF3FP3-201ENST00000434851 1086 ntBASIC16.22■□□□□ 0.19
SHC3Q92529 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.22■□□□□ 0.19
SHC3Q92529 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHC3Q92529 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.22■□□□□ 0.19
SHC3Q92529 AC022616.1-201ENST00000518688 554 ntBASIC16.22■□□□□ 0.19
SHC3Q92529 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.22■□□□□ 0.19
SHC3Q92529 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHC3Q92529 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.22■□□□□ 0.19
SHC3Q92529 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SHC3Q92529 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SHC3Q92529 AL603764.1-201ENST00000636452 321 ntBASIC16.22■□□□□ 0.19
SHC3Q92529 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHC3Q92529 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.22■□□□□ 0.19
SHC3Q92529 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.22■□□□□ 0.19
SHC3Q92529 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHC3Q92529 NORAD-201ENST00000565493 5339 ntBASIC16.22■□□□□ 0.19
SHC3Q92529 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.22■□□□□ 0.19
SHC3Q92529 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHC3Q92529 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHC3Q92529 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHC3Q92529 AC018665.1-201ENST00000622927 1362 ntBASIC16.22■□□□□ 0.19
SHC3Q92529 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHC3Q92529 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.22■□□□□ 0.19
SHC3Q92529 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SHC3Q92529 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHC3Q92529 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.22■□□□□ 0.19
SHC3Q92529 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHC3Q92529 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC3Q92529 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC3Q92529 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC3Q92529 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC3Q92529 AC007686.3-201ENST00000619017 3487 ntBASIC16.21■□□□□ 0.19
SHC3Q92529 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC3Q92529 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SHC3Q92529 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.21■□□□□ 0.19
SHC3Q92529 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC3Q92529 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SHC3Q92529 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SHC3Q92529 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHC3Q92529 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC3Q92529 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.21■□□□□ 0.19
SHC3Q92529 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC3Q92529 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC3Q92529 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.21■□□□□ 0.19
SHC3Q92529 ACTBP8-201ENST00000403258 1108 ntBASIC16.21■□□□□ 0.19
SHC3Q92529 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC3Q92529 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.21■□□□□ 0.19
SHC3Q92529 AL162726.2-201ENST00000438986 1017 ntBASIC16.21■□□□□ 0.19
SHC3Q92529 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.21■□□□□ 0.19
SHC3Q92529 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.21■□□□□ 0.19
SHC3Q92529 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHC3Q92529 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.21■□□□□ 0.19
SHC3Q92529 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.21■□□□□ 0.19
SHC3Q92529 AP001063.1-201ENST00000568332 529 ntBASIC16.21■□□□□ 0.19
SHC3Q92529 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.21■□□□□ 0.19
SHC3Q92529 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.21■□□□□ 0.19
SHC3Q92529 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SHC3Q92529 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC3Q92529 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHC3Q92529 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC3Q92529 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SHC3Q92529 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC3Q92529 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHC3Q92529 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SHC3Q92529 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHC3Q92529 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SHC3Q92529 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHC3Q92529 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC3Q92529 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SHC3Q92529 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SHC3Q92529 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SHC3Q92529 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SHC3Q92529 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.2■□□□□ 0.18
SHC3Q92529 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHC3Q92529 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHC3Q92529 AC005912.2-201ENST00000619492 2400 ntBASIC16.2■□□□□ 0.18
SHC3Q92529 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SHC3Q92529 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHC3Q92529 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHC3Q92529 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SHC3Q92529 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHC3Q92529 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.2■□□□□ 0.18
SHC3Q92529 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SHC3Q92529 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHC3Q92529 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SHC3Q92529 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHC3Q92529 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.2■□□□□ 0.18
SHC3Q92529 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.2■□□□□ 0.18
SHC3Q92529 DGCR5-201ENST00000399539 862 ntBASIC16.2■□□□□ 0.18
SHC3Q92529 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHC3Q92529 HMGN1P19-201ENST00000436976 333 ntBASIC16.2■□□□□ 0.18
SHC3Q92529 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms