Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNED1Q8TER0 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.18■□□□□ 0.5
SNED1Q8TER0 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC18.18■□□□□ 0.5
SNED1Q8TER0 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNED1Q8TER0 AC097065.1-201ENST00000425737 517 ntBASIC18.18■□□□□ 0.5
SNED1Q8TER0 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC18.18■□□□□ 0.5
SNED1Q8TER0 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC18.18■□□□□ 0.5
SNED1Q8TER0 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC18.18■□□□□ 0.5
SNED1Q8TER0 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNED1Q8TER0 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC18.18■□□□□ 0.5
SNED1Q8TER0 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC18.18■□□□□ 0.5
SNED1Q8TER0 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNED1Q8TER0 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SNED1Q8TER0 CYP51A1P3-201ENST00000400072 1428 ntBASIC18.18■□□□□ 0.5
SNED1Q8TER0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.18■□□□□ 0.5
SNED1Q8TER0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.18■□□□□ 0.5
SNED1Q8TER0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNED1Q8TER0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNED1Q8TER0 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SNED1Q8TER0 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC18.18■□□□□ 0.5
SNED1Q8TER0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.18■□□□□ 0.5
SNED1Q8TER0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNED1Q8TER0 FRMPD2B-201ENST00000431305 1347 ntBASIC18.18■□□□□ 0.5
SNED1Q8TER0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNED1Q8TER0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.17■□□□□ 0.5
SNED1Q8TER0 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SNED1Q8TER0 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.17■□□□□ 0.5
SNED1Q8TER0 NCR3-202ENST00000376071 541 ntTSL 5 BASIC18.17■□□□□ 0.5
SNED1Q8TER0 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC18.17■□□□□ 0.5
SNED1Q8TER0 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC18.17■□□□□ 0.5
SNED1Q8TER0 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC18.17■□□□□ 0.5
SNED1Q8TER0 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNED1Q8TER0 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SNED1Q8TER0 AC009884.2-201ENST00000603110 324 ntBASIC18.17■□□□□ 0.5
SNED1Q8TER0 BX088702.1-201ENST00000610784 235 ntBASIC18.17■□□□□ 0.5
SNED1Q8TER0 AC084781.1-201ENST00000613737 656 ntBASIC18.17■□□□□ 0.5
SNED1Q8TER0 MIR6858-201ENST00000620733 67 ntBASIC18.17■□□□□ 0.5
SNED1Q8TER0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNED1Q8TER0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNED1Q8TER0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SNED1Q8TER0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.17■□□□□ 0.5
SNED1Q8TER0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNED1Q8TER0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNED1Q8TER0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNED1Q8TER0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.17■□□□□ 0.5
SNED1Q8TER0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SNED1Q8TER0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNED1Q8TER0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNED1Q8TER0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.16■□□□□ 0.5
SNED1Q8TER0 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SNED1Q8TER0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNED1Q8TER0 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.16■□□□□ 0.5
SNED1Q8TER0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNED1Q8TER0 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNED1Q8TER0 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SNED1Q8TER0 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC18.16■□□□□ 0.5
SNED1Q8TER0 TLE1P1-201ENST00000422965 589 ntBASIC18.16■□□□□ 0.5
SNED1Q8TER0 SKA2-202ENST00000437036 625 ntTSL 2 BASIC18.16■□□□□ 0.5
SNED1Q8TER0 GCOM2-201ENST00000509133 1104 ntBASIC18.16■□□□□ 0.5
SNED1Q8TER0 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNED1Q8TER0 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18.16■□□□□ 0.5
SNED1Q8TER0 MIR4522-201ENST00000584932 87 ntBASIC18.16■□□□□ 0.5
SNED1Q8TER0 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC18.16■□□□□ 0.5
SNED1Q8TER0 AC009084.3-201ENST00000623356 437 ntBASIC18.16■□□□□ 0.5
SNED1Q8TER0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNED1Q8TER0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNED1Q8TER0 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.16■□□□□ 0.5
SNED1Q8TER0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.16■□□□□ 0.5
SNED1Q8TER0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNED1Q8TER0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNED1Q8TER0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNED1Q8TER0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.16■□□□□ 0.5
SNED1Q8TER0 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SNED1Q8TER0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNED1Q8TER0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.16■□□□□ 0.5
SNED1Q8TER0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.16■□□□□ 0.5
SNED1Q8TER0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.16■□□□□ 0.5
SNED1Q8TER0 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNED1Q8TER0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.16■□□□□ 0.5
SNED1Q8TER0 AC090616.6-203ENST00000579186 1945 ntBASIC18.16■□□□□ 0.5
SNED1Q8TER0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNED1Q8TER0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SNED1Q8TER0 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.16■□□□□ 0.5
SNED1Q8TER0 KRT8P31-201ENST00000504812 1408 ntBASIC18.16■□□□□ 0.5
SNED1Q8TER0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SNED1Q8TER0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNED1Q8TER0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SNED1Q8TER0 AP000356.3-201ENST00000382243 753 ntBASIC18.15■□□□□ 0.5
SNED1Q8TER0 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SNED1Q8TER0 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNED1Q8TER0 XBP1P1-201ENST00000436573 652 ntBASIC18.15■□□□□ 0.5
SNED1Q8TER0 RPL7P35-201ENST00000446943 740 ntBASIC18.15■□□□□ 0.5
SNED1Q8TER0 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SNED1Q8TER0 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.15■□□□□ 0.5
SNED1Q8TER0 RN7SL818P-201ENST00000485099 259 ntBASIC18.15■□□□□ 0.5
SNED1Q8TER0 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNED1Q8TER0 AC131206.1-201ENST00000538078 1211 ntBASIC18.15■□□□□ 0.5
SNED1Q8TER0 AC027237.1-201ENST00000560942 655 ntBASIC18.15■□□□□ 0.5
SNED1Q8TER0 AC141586.1-203ENST00000567242 366 ntBASIC18.15■□□□□ 0.5
SNED1Q8TER0 NAT9-220ENST00000582870 896 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms