Protein–RNA interactions for Protein: Q8TDY2

RB1CC1, RB1-inducible coiled-coil protein 1, humanhuman

Predictions only

Length 1,594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1Q8TDY2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
RB1CC1Q8TDY2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC28.13■■■□□ 2.09
RB1CC1Q8TDY2 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
RB1CC1Q8TDY2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
RB1CC1Q8TDY2 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
RB1CC1Q8TDY2 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
RB1CC1Q8TDY2 IGHEP2-201ENST00000519308 1256 ntBASIC28.12■■■□□ 2.09
RB1CC1Q8TDY2 NAA40-205ENST00000539656 577 ntTSL 4 BASIC28.12■■■□□ 2.09
RB1CC1Q8TDY2 KNOP1P1-201ENST00000542108 989 ntBASIC28.12■■■□□ 2.09
RB1CC1Q8TDY2 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC28.12■■■□□ 2.09
RB1CC1Q8TDY2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC28.12■■■□□ 2.09
RB1CC1Q8TDY2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC28.12■■■□□ 2.09
RB1CC1Q8TDY2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
RB1CC1Q8TDY2 AC013726.1-201ENST00000563747 2285 ntBASIC28.12■■■□□ 2.09
RB1CC1Q8TDY2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
RB1CC1Q8TDY2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC28.12■■■□□ 2.09
RB1CC1Q8TDY2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
RB1CC1Q8TDY2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC28.12■■■□□ 2.09
RB1CC1Q8TDY2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC28.12■■■□□ 2.09
RB1CC1Q8TDY2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC28.12■■■□□ 2.09
RB1CC1Q8TDY2 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 HIST1H2APS2-201ENST00000454426 370 ntBASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 LILRP1-201ENST00000444199 1370 ntBASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 IGHVIII-5-2-201ENST00000522505 261 ntBASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
RB1CC1Q8TDY2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 AC011676.5-201ENST00000624864 2660 ntBASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 AP002353.1-201ENST00000528257 1599 ntBASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 BCRP4-201ENST00000506079 804 ntBASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC28.1■■■□□ 2.09
RB1CC1Q8TDY2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
RB1CC1Q8TDY2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
RB1CC1Q8TDY2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC28.09■■■□□ 2.09
RB1CC1Q8TDY2 PIFO-201ENST00000369737 746 ntTSL 2 BASIC28.09■■■□□ 2.09
RB1CC1Q8TDY2 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
RB1CC1Q8TDY2 AC006529.1-201ENST00000459978 637 ntBASIC28.09■■■□□ 2.09
RB1CC1Q8TDY2 RPS18P9-201ENST00000482817 460 ntBASIC28.09■■■□□ 2.09
RB1CC1Q8TDY2 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC28.09■■■□□ 2.09
RB1CC1Q8TDY2 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC28.09■■■□□ 2.09
RB1CC1Q8TDY2 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC28.09■■■□□ 2.09
RB1CC1Q8TDY2 AC124068.2-201ENST00000569473 1109 ntBASIC28.09■■■□□ 2.09
RB1CC1Q8TDY2 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC28.09■■■□□ 2.09
RB1CC1Q8TDY2 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC28.09■■■□□ 2.09
RB1CC1Q8TDY2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC28.09■■■□□ 2.09
RB1CC1Q8TDY2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC28.09■■■□□ 2.09
RB1CC1Q8TDY2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
RB1CC1Q8TDY2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
RB1CC1Q8TDY2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC28.09■■■□□ 2.09
RB1CC1Q8TDY2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
RB1CC1Q8TDY2 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC28.08■■■□□ 2.09
RB1CC1Q8TDY2 AC012313.1-201ENST00000593393 3059 ntBASIC28.08■■■□□ 2.09
RB1CC1Q8TDY2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC28.08■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms