Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 FGD5P1-202ENST00000614866 2498 ntBASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 REXO1L4P-201ENST00000605109 1937 ntBASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 AC093214.1-201ENST00000511688 1107 ntBASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 AC008738.7-201ENST00000609744 511 ntBASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 GPALPP1-207ENST00000611650 899 ntBASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAF3IP1Q8TDR0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRAF3IP1Q8TDR0 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAF3IP1Q8TDR0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
TRAF3IP1Q8TDR0 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAF3IP1Q8TDR0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.96■□□□□ 0.14
TRAF3IP1Q8TDR0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRAF3IP1Q8TDR0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAF3IP1Q8TDR0 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRAF3IP1Q8TDR0 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAF3IP1Q8TDR0 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 ACE3P-201ENST00000423435 1973 ntBASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 REXO1L2P-201ENST00000425429 2069 ntBASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 AC004890.2-204ENST00000481968 304 ntBASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 AC036164.1-201ENST00000570544 333 ntBASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 SRD5A3P1-201ENST00000603021 949 ntBASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAF3IP1Q8TDR0 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms