Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RDH11Q8TC12 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RDH11Q8TC12 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
RDH11Q8TC12 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
RDH11Q8TC12 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.03■□□□□ -0
RDH11Q8TC12 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RDH11Q8TC12 AC018665.1-201ENST00000622927 1362 ntBASIC15.03■□□□□ -0
RDH11Q8TC12 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RDH11Q8TC12 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.03■□□□□ -0
RDH11Q8TC12 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.03■□□□□ -0
RDH11Q8TC12 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.03■□□□□ -0
RDH11Q8TC12 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.03■□□□□ -0
RDH11Q8TC12 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.03■□□□□ -0
RDH11Q8TC12 METTL21AP1-201ENST00000438852 635 ntBASIC15.03■□□□□ -0
RDH11Q8TC12 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.03■□□□□ -0
RDH11Q8TC12 AL512361.1-201ENST00000554200 418 ntBASIC15.03■□□□□ -0
RDH11Q8TC12 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.03■□□□□ -0
RDH11Q8TC12 AC010336.2-201ENST00000564226 506 ntBASIC15.03■□□□□ -0
RDH11Q8TC12 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.03■□□□□ -0
RDH11Q8TC12 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.03■□□□□ -0
RDH11Q8TC12 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.03■□□□□ -0
RDH11Q8TC12 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.03■□□□□ -0
RDH11Q8TC12 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RDH11Q8TC12 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
RDH11Q8TC12 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.03■□□□□ -0
RDH11Q8TC12 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 AC092135.3-201ENST00000624151 1846 ntBASIC15.03■□□□□ -0
RDH11Q8TC12 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.03■□□□□ -0
RDH11Q8TC12 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.03■□□□□ -0
RDH11Q8TC12 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RDH11Q8TC12 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RDH11Q8TC12 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RDH11Q8TC12 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RDH11Q8TC12 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RDH11Q8TC12 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RDH11Q8TC12 KRT18P28-201ENST00000453838 1332 ntBASIC15.02■□□□□ -0
RDH11Q8TC12 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.02■□□□□ -0
RDH11Q8TC12 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
RDH11Q8TC12 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RDH11Q8TC12 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RDH11Q8TC12 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.02■□□□□ -0
RDH11Q8TC12 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.02■□□□□ -0
RDH11Q8TC12 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.02■□□□□ -0
RDH11Q8TC12 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.02■□□□□ -0
RDH11Q8TC12 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.02■□□□□ -0
RDH11Q8TC12 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.02■□□□□ -0
RDH11Q8TC12 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
RDH11Q8TC12 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.02■□□□□ -0
RDH11Q8TC12 AC051619.7-201ENST00000568314 623 ntBASIC15.02■□□□□ -0
RDH11Q8TC12 TEX28P1-201ENST00000613479 1221 ntBASIC15.02■□□□□ -0
RDH11Q8TC12 TEX28P2-201ENST00000617764 1221 ntBASIC15.02■□□□□ -0
RDH11Q8TC12 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RDH11Q8TC12 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RDH11Q8TC12 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RDH11Q8TC12 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RDH11Q8TC12 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RDH11Q8TC12 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RDH11Q8TC12 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.02□□□□□ -0.01
RDH11Q8TC12 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.02□□□□□ -0.01
RDH11Q8TC12 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RDH11Q8TC12 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
RDH11Q8TC12 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.02□□□□□ -0.01
RDH11Q8TC12 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RDH11Q8TC12 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RDH11Q8TC12 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RDH11Q8TC12 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RDH11Q8TC12 AC041040.2-201ENST00000622926 2899 ntBASIC15.02□□□□□ -0.01
RDH11Q8TC12 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RDH11Q8TC12 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RDH11Q8TC12 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
RDH11Q8TC12 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RDH11Q8TC12 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RDH11Q8TC12 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RDH11Q8TC12 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RDH11Q8TC12 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RDH11Q8TC12 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RDH11Q8TC12 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RDH11Q8TC12 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RDH11Q8TC12 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RDH11Q8TC12 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RDH11Q8TC12 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms