Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FNDC9Q8TBE3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.77□□□□□ -0.2
FNDC9Q8TBE3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.77□□□□□ -0.2
FNDC9Q8TBE3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
FNDC9Q8TBE3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
FNDC9Q8TBE3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
FNDC9Q8TBE3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
FNDC9Q8TBE3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 BAATP1-201ENST00000412284 1225 ntBASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 TNRC18P2-201ENST00000417666 2714 ntBASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 KRT43P-201ENST00000434019 910 ntBASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 AC234783.1-201ENST00000441761 496 ntBASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 AC244107.1-201ENST00000442033 332 ntBASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 ATP5G2P4-201ENST00000442175 420 ntBASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 BCRP2-202ENST00000447763 634 ntBASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 CROCCP4-201ENST00000457096 498 ntBASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 BCRP6-201ENST00000510112 632 ntBASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 BCRP7-201ENST00000511549 544 ntBASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 AC134312.5-201ENST00000568031 1313 ntBASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 AL022328.1-201ENST00000610050 478 ntBASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 BX539320.1-201ENST00000623759 877 ntBASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
FNDC9Q8TBE3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 RPL5P21-201ENST00000404620 815 ntBASIC13.76□□□□□ -0.21
FNDC9Q8TBE3 AC012441.1-201ENST00000446669 685 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms