Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 AC113367.3-201ENST00000508316 1912 ntBASIC13.95□□□□□ -0.18
CLDN22Q8N7P3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN22Q8N7P3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN22Q8N7P3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN22Q8N7P3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.95□□□□□ -0.18
CLDN22Q8N7P3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN22Q8N7P3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN22Q8N7P3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.95□□□□□ -0.18
CLDN22Q8N7P3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN22Q8N7P3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN22Q8N7P3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.95□□□□□ -0.18
CLDN22Q8N7P3 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CLDN22Q8N7P3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 C8orf49-201ENST00000525043 1968 ntBASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 AP001160.2-201ENST00000596071 487 ntBASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 LINC01115-203ENST00000606068 577 ntBASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 AL359183.1-201ENST00000623796 2132 ntBASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CLDN22Q8N7P3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 AC138969.3-201ENST00000546612 1459 ntBASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 AC138932.2-201ENST00000548268 1459 ntBASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 AC126755.4-201ENST00000549796 1459 ntBASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 AL928921.2-201ENST00000641325 2442 ntBASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 AC015656.1-201ENST00000624209 3578 ntBASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 CNN2P2-201ENST00000443536 909 ntBASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 CNN2P3-201ENST00000450201 906 ntBASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 AL136317.3-201ENST00000618497 906 ntBASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CLDN22Q8N7P3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN22Q8N7P3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN22Q8N7P3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN22Q8N7P3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDN22Q8N7P3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN22Q8N7P3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN22Q8N7P3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN22Q8N7P3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDN22Q8N7P3 MBLAC2-202ENST00000514906 1936 ntBASIC13.92□□□□□ -0.18
CLDN22Q8N7P3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN22Q8N7P3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN22Q8N7P3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN22Q8N7P3 LINC01230-201ENST00000625222 3017 ntBASIC13.92□□□□□ -0.18
CLDN22Q8N7P3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms