Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 AC003101.2-201ENST00000612557 442 ntBASIC12.78□□□□□ -0.36
COMMD1Q8N668 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 CICP20-201ENST00000443330 2801 ntBASIC12.78□□□□□ -0.36
COMMD1Q8N668 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COMMD1Q8N668 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.78□□□□□ -0.36
COMMD1Q8N668 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
COMMD1Q8N668 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COMMD1Q8N668 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
COMMD1Q8N668 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COMMD1Q8N668 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
COMMD1Q8N668 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
COMMD1Q8N668 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COMMD1Q8N668 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COMMD1Q8N668 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COMMD1Q8N668 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.77□□□□□ -0.36
COMMD1Q8N668 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
COMMD1Q8N668 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
COMMD1Q8N668 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COMMD1Q8N668 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COMMD1Q8N668 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COMMD1Q8N668 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COMMD1Q8N668 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COMMD1Q8N668 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COMMD1Q8N668 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 MIR943-201ENST00000401286 94 ntBASIC12.77□□□□□ -0.37
COMMD1Q8N668 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 HMGN1P19-201ENST00000436976 333 ntBASIC12.77□□□□□ -0.37
COMMD1Q8N668 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COMMD1Q8N668 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COMMD1Q8N668 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
COMMD1Q8N668 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COMMD1Q8N668 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COMMD1Q8N668 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COMMD1Q8N668 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COMMD1Q8N668 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COMMD1Q8N668 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COMMD1Q8N668 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COMMD1Q8N668 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
COMMD1Q8N668 AC005622.1-201ENST00000636801 1703 ntBASIC12.76□□□□□ -0.37
COMMD1Q8N668 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.76□□□□□ -0.37
COMMD1Q8N668 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.76□□□□□ -0.37
COMMD1Q8N668 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
COMMD1Q8N668 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COMMD1Q8N668 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COMMD1Q8N668 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COMMD1Q8N668 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
COMMD1Q8N668 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COMMD1Q8N668 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COMMD1Q8N668 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COMMD1Q8N668 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COMMD1Q8N668 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COMMD1Q8N668 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COMMD1Q8N668 CICP17-201ENST00000418553 2377 ntBASIC12.76□□□□□ -0.37
COMMD1Q8N668 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms