Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00311Q8N616 AP006294.1-201ENST00000415407 339 ntBASIC12.33□□□□□ -0.44
LINC00311Q8N616 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 ACTG1P3-201ENST00000431775 1114 ntBASIC12.33□□□□□ -0.44
LINC00311Q8N616 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00311Q8N616 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00311Q8N616 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00311Q8N616 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00311Q8N616 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00311Q8N616 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00311Q8N616 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00311Q8N616 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00311Q8N616 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00311Q8N616 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00311Q8N616 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00311Q8N616 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00311Q8N616 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00311Q8N616 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00311Q8N616 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00311Q8N616 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00311Q8N616 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC00311Q8N616 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC00311Q8N616 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 CICP14-201ENST00000629111 2732 ntBASIC12.32□□□□□ -0.44
LINC00311Q8N616 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00311Q8N616 AC023090.2-201ENST00000625182 2110 ntBASIC12.32□□□□□ -0.44
LINC00311Q8N616 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00311Q8N616 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00311Q8N616 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00311Q8N616 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00311Q8N616 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00311Q8N616 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00311Q8N616 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00311Q8N616 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00311Q8N616 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00311Q8N616 EIF3FP3-201ENST00000434851 1086 ntBASIC12.32□□□□□ -0.44
LINC00311Q8N616 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00311Q8N616 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00311Q8N616 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00311Q8N616 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00311Q8N616 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00311Q8N616 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00311Q8N616 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00311Q8N616 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00311Q8N616 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00311Q8N616 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00311Q8N616 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 FLJ16779-201ENST00000612722 7638 ntBASIC12.32□□□□□ -0.44
LINC00311Q8N616 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00311Q8N616 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00311Q8N616 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00311Q8N616 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00311Q8N616 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00311Q8N616 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00311Q8N616 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00311Q8N616 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00311Q8N616 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
LINC00311Q8N616 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms