Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCDC33Q8N5R6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 AC093525.8-201ENST00000624099 1342 ntBASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 ACTG1P3-201ENST00000431775 1114 ntBASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 KLF2P4-201ENST00000451959 1225 ntBASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 MIR4538-201ENST00000581377 78 ntBASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 BRI3BPP1-201ENST00000594224 787 ntBASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC33Q8N5R6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 LINC00528-201ENST00000600723 2160 ntBASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 KRT8P44-201ENST00000441609 1350 ntBASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 AC134915.1-201ENST00000426461 574 ntBASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.04■□□□□ 0.16
CCDC33Q8N5R6 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms