Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 KRT8P4-201ENST00000509735 1454 ntBASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
SYNPOQ8N3V7 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 HIST2H2BB-201ENST00000449108 381 ntBASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 SPTLC1P5-201ENST00000450718 252 ntBASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 AC021723.1-201ENST00000486306 515 ntBASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 AC106794.1-201ENST00000506935 792 ntBASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 AL391280.1-201ENST00000506969 1062 ntBASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 AC106820.3-201ENST00000561653 397 ntBASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 RN7SL774P-201ENST00000577467 290 ntBASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 AC091544.8-201ENST00000619490 361 ntBASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 AL353726.2-201ENST00000623259 884 ntBASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 AC128714.1-201ENST00000637035 887 ntBASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SYNPOQ8N3V7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 AC084364.1-201ENST00000551967 1556 ntBASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 DPM3-202ENST00000368399 517 ntBASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 TUBB8P8-201ENST00000458717 1058 ntBASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 AC100850.1-201ENST00000506768 649 ntBASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 AC022217.1-201ENST00000521069 738 ntBASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.42■□□□□ 0.06
SYNPOQ8N3V7 MIR6727-201ENST00000620702 65 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms