Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX5Q8N196 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX5Q8N196 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX5Q8N196 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX5Q8N196 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX5Q8N196 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX5Q8N196 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.64■□□□□ 0.09
SIX5Q8N196 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX5Q8N196 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
SIX5Q8N196 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX5Q8N196 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
SIX5Q8N196 DPM3-202ENST00000368399 517 ntBASIC15.64■□□□□ 0.09
SIX5Q8N196 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SIX5Q8N196 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.64■□□□□ 0.09
SIX5Q8N196 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SIX5Q8N196 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.64■□□□□ 0.09
SIX5Q8N196 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.64■□□□□ 0.09
SIX5Q8N196 AC114501.1-201ENST00000445949 172 ntBASIC15.64■□□□□ 0.09
SIX5Q8N196 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.64■□□□□ 0.09
SIX5Q8N196 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX5Q8N196 RN7SL818P-201ENST00000485099 259 ntBASIC15.64■□□□□ 0.09
SIX5Q8N196 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.64■□□□□ 0.09
SIX5Q8N196 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX5Q8N196 AC100850.1-201ENST00000506768 649 ntBASIC15.64■□□□□ 0.09
SIX5Q8N196 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.64■□□□□ 0.09
SIX5Q8N196 AL161670.2-201ENST00000557650 1227 ntBASIC15.64■□□□□ 0.09
SIX5Q8N196 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.64■□□□□ 0.09
SIX5Q8N196 AC013355.1-201ENST00000562625 723 ntBASIC15.64■□□□□ 0.09
SIX5Q8N196 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.64■□□□□ 0.09
SIX5Q8N196 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.64■□□□□ 0.09
SIX5Q8N196 RN7SL725P-201ENST00000606439 259 ntBASIC15.64■□□□□ 0.09
SIX5Q8N196 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
SIX5Q8N196 PRSS30P-206ENST00000641773 873 ntBASIC15.64■□□□□ 0.09
SIX5Q8N196 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX5Q8N196 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.64■□□□□ 0.09
SIX5Q8N196 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SIX5Q8N196 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX5Q8N196 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX5Q8N196 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SIX5Q8N196 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX5Q8N196 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX5Q8N196 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX5Q8N196 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SIX5Q8N196 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.64■□□□□ 0.09
SIX5Q8N196 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX5Q8N196 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.64■□□□□ 0.09
SIX5Q8N196 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SIX5Q8N196 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SIX5Q8N196 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.63■□□□□ 0.09
SIX5Q8N196 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SIX5Q8N196 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SIX5Q8N196 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SIX5Q8N196 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.63■□□□□ 0.09
SIX5Q8N196 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.63■□□□□ 0.09
SIX5Q8N196 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.63■□□□□ 0.09
SIX5Q8N196 AL139094.1-201ENST00000405549 1188 ntBASIC15.63■□□□□ 0.09
SIX5Q8N196 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SIX5Q8N196 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.63■□□□□ 0.09
SIX5Q8N196 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.63■□□□□ 0.09
SIX5Q8N196 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.63■□□□□ 0.09
SIX5Q8N196 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC15.63■□□□□ 0.09
SIX5Q8N196 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.63■□□□□ 0.09
SIX5Q8N196 AL391280.1-201ENST00000506969 1062 ntBASIC15.63■□□□□ 0.09
SIX5Q8N196 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.63■□□□□ 0.09
SIX5Q8N196 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.63■□□□□ 0.09
SIX5Q8N196 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.63■□□□□ 0.09
SIX5Q8N196 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.63■□□□□ 0.09
SIX5Q8N196 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.63■□□□□ 0.09
SIX5Q8N196 AF254983.2-201ENST00000612331 135 ntBASIC15.63■□□□□ 0.09
SIX5Q8N196 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
SIX5Q8N196 AC022748.3-201ENST00000621828 275 ntBASIC15.63■□□□□ 0.09
SIX5Q8N196 HLA-C-210ENST00000640219 976 ntBASIC15.63■□□□□ 0.09
SIX5Q8N196 AL805961.1-203ENST00000641078 1258 ntBASIC15.63■□□□□ 0.09
SIX5Q8N196 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SIX5Q8N196 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.63■□□□□ 0.09
SIX5Q8N196 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SIX5Q8N196 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.63■□□□□ 0.09
SIX5Q8N196 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.63■□□□□ 0.09
SIX5Q8N196 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX5Q8N196 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms