Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 AC136621.1-201ENST00000624017 2304 ntBASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.94□□□□□ -0.18
COL27A1Q8IZC6 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 HIST2H2BA-201ENST00000412169 381 ntBASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 AL512306.1-201ENST00000432698 848 ntBASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 MIR5196-201ENST00000578146 115 ntBASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 LTB4R2-202ENST00000528054 3092 ntBASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 MIR6769A-201ENST00000617340 73 ntBASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 AC105137.3-201ENST00000617588 984 ntBASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
COL27A1Q8IZC6 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 AC084018.2-201ENST00000613093 2607 ntBASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 WASH3P-207ENST00000560956 1394 ntBASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 AC012362.1-201ENST00000434906 739 ntBASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 RPL7P35-201ENST00000446943 740 ntBASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 AC079112.1-201ENST00000454972 939 ntBASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 AC127024.7-201ENST00000625101 200 ntBASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 LINC01101-201ENST00000622953 1884 ntBASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 330 ms