Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC010319.3-201ENST00000597028 470 ntBASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 FLJ16779-201ENST00000612722 7638 ntBASIC15.35■□□□□ 0.05
LYSMD3Q7Z3D4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 RNU1-114P-201ENST00000365297 166 ntBASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 AL512384.1-201ENST00000406683 331 ntBASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 AC132938.2-201ENST00000579188 680 ntBASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 AL591163.1-201ENST00000641757 987 ntBASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 AL157414.3-201ENST00000624276 1954 ntBASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 WASH3P-207ENST00000560956 1394 ntBASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 REXO1L2P-201ENST00000425429 2069 ntBASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
LYSMD3Q7Z3D4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.33■□□□□ 0.05
LYSMD3Q7Z3D4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
LYSMD3Q7Z3D4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LYSMD3Q7Z3D4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LYSMD3Q7Z3D4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 AP001063.1-201ENST00000568332 529 ntBASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 MIR5189-201ENST00000577370 114 ntBASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.33■□□□□ 0.04
LYSMD3Q7Z3D4 IGHV3-72-202ENST00000621503 303 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms