Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 AC126365.1-201ENST00000578585 1514 ntBASIC13.44□□□□□ -0.26
C11orf88Q6PI97 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf88Q6PI97 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 AC005252.3-201ENST00000623855 2258 ntBASIC13.43□□□□□ -0.26
C11orf88Q6PI97 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
C11orf88Q6PI97 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 MIR4515-201ENST00000584082 81 ntBASIC13.42□□□□□ -0.26
C11orf88Q6PI97 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 AC140479.7-201ENST00000636301 2332 ntBASIC13.42□□□□□ -0.26
C11orf88Q6PI97 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.42□□□□□ -0.26
C11orf88Q6PI97 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms