Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 BCRP2-202ENST00000447763 634 ntBASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 ACA64.2-201ENST00000459014 129 ntBASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 BCRP6-201ENST00000510112 632 ntBASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 BCRP7-201ENST00000511549 544 ntBASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 IGHV3-71-201ENST00000523324 359 ntBASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 AC068587.3-201ENST00000526613 355 ntBASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 RAB43P1-201ENST00000561790 589 ntBASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 AP001063.1-201ENST00000568332 529 ntBASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 LINC00528-201ENST00000600723 2160 ntBASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.93■□□□□ 0.14
RFWD3Q6PCD5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 AC233724.13-201ENST00000598383 410 ntBASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 AL512343.1-201ENST00000605837 169 ntBASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 CICP11-201ENST00000434745 2827 ntBASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 AC134312.5-201ENST00000568031 1313 ntBASIC15.92■□□□□ 0.14
RFWD3Q6PCD5 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 BAATP1-201ENST00000412284 1225 ntBASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.91■□□□□ 0.14
RFWD3Q6PCD5 ATP5G2P4-201ENST00000442175 420 ntBASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms