Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 CHMP1AP1-201ENST00000445563 662 ntBASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 AC244157.2-201ENST00000616239 1006 ntBASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 LINC00554-201ENST00000564841 3011 ntBASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 AL360270.3-201ENST00000609118 1348 ntBASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC62Q6P9F0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 AC132872.4-202ENST00000622924 2756 ntBASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 AC079178.1-201ENST00000420915 656 ntBASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 POM121L10P-201ENST00000436994 1285 ntBASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 AKR7A2P1-201ENST00000460134 915 ntBASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 AC091804.1-201ENST00000486888 567 ntBASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 MESTP3-201ENST00000503460 968 ntBASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 AC138466.3-201ENST00000619983 221 ntBASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 CLUHP2-201ENST00000426660 1303 ntBASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 AC090616.6-203ENST00000579186 1945 ntBASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 MST1L-201ENST00000442552 2185 ntBASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC62Q6P9F0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
CCDC62Q6P9F0 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CCDC62Q6P9F0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.08■□□□□ 0.33
CCDC62Q6P9F0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC62Q6P9F0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
CCDC62Q6P9F0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC62Q6P9F0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC62Q6P9F0 AL365203.3-201ENST00000609742 2057 ntBASIC17.08■□□□□ 0.33
CCDC62Q6P9F0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC62Q6P9F0 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.08■□□□□ 0.33
CCDC62Q6P9F0 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.08■□□□□ 0.33
CCDC62Q6P9F0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC62Q6P9F0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC62Q6P9F0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC62Q6P9F0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC62Q6P9F0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCDC62Q6P9F0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC62Q6P9F0 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms