Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.8□□□□□ -0.2
RTL6Q6ICC9 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 C2orf27AP3-201ENST00000434123 579 ntBASIC13.8□□□□□ -0.2
RTL6Q6ICC9 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 AC079316.1-201ENST00000548397 411 ntBASIC13.8□□□□□ -0.2
RTL6Q6ICC9 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 AL354718.3-201ENST00000616414 581 ntBASIC13.8□□□□□ -0.2
RTL6Q6ICC9 CR382287.1-201ENST00000623954 586 ntBASIC13.8□□□□□ -0.2
RTL6Q6ICC9 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 SBF1P1-201ENST00000444527 5631 ntBASIC13.8□□□□□ -0.2
RTL6Q6ICC9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RTL6Q6ICC9 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 AC008687.7-202ENST00000637404 953 ntBASIC13.79□□□□□ -0.2
RTL6Q6ICC9 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 AC013268.4-201ENST00000637413 2228 ntBASIC13.79□□□□□ -0.2
RTL6Q6ICC9 SSR4P1-203ENST00000599569 2260 ntBASIC13.79□□□□□ -0.2
RTL6Q6ICC9 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 PPT1-215ENST00000641471 2368 ntBASIC13.79□□□□□ -0.2
RTL6Q6ICC9 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RTL6Q6ICC9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTL6Q6ICC9 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RTL6Q6ICC9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTL6Q6ICC9 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RTL6Q6ICC9 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTL6Q6ICC9 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTL6Q6ICC9 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTL6Q6ICC9 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RTL6Q6ICC9 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTL6Q6ICC9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTL6Q6ICC9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.78□□□□□ -0.2
RTL6Q6ICC9 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.78□□□□□ -0.2
RTL6Q6ICC9 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTL6Q6ICC9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTL6Q6ICC9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTL6Q6ICC9 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTL6Q6ICC9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTL6Q6ICC9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.78□□□□□ -0.2
RTL6Q6ICC9 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTL6Q6ICC9 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms