Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 MIR769-201ENST00000390225 118 ntBASIC15.8■□□□□ 0.12
TPGS2Q68CL5 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.8■□□□□ 0.12
TPGS2Q68CL5 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 AC005324.6-201ENST00000587972 613 ntBASIC15.8■□□□□ 0.12
TPGS2Q68CL5 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 AC004923.1-202ENST00000642106 209 ntBASIC15.8■□□□□ 0.12
TPGS2Q68CL5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 AC009093.2-202ENST00000620513 2079 ntBASIC15.8■□□□□ 0.12
TPGS2Q68CL5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPGS2Q68CL5 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 C18orf15-201ENST00000623680 2534 ntBASIC15.79■□□□□ 0.12
TPGS2Q68CL5 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 TUBBP5-203ENST00000508529 1334 ntBASIC15.79■□□□□ 0.12
TPGS2Q68CL5 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 RNMTL1P1-201ENST00000454103 560 ntBASIC15.79■□□□□ 0.12
TPGS2Q68CL5 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 ALG3P1-201ENST00000508806 1114 ntBASIC15.79■□□□□ 0.12
TPGS2Q68CL5 AC013355.1-201ENST00000562625 723 ntBASIC15.79■□□□□ 0.12
TPGS2Q68CL5 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 AC100757.4-201ENST00000626934 759 ntBASIC15.79■□□□□ 0.12
TPGS2Q68CL5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 AC020910.5-201ENST00000623668 1865 ntBASIC15.79■□□□□ 0.12
TPGS2Q68CL5 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPGS2Q68CL5 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPGS2Q68CL5 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPGS2Q68CL5 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TPGS2Q68CL5 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPGS2Q68CL5 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TPGS2Q68CL5 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.78■□□□□ 0.12
TPGS2Q68CL5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
TPGS2Q68CL5 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.78■□□□□ 0.12
TPGS2Q68CL5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.78■□□□□ 0.12
TPGS2Q68CL5 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPGS2Q68CL5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.78■□□□□ 0.12
TPGS2Q68CL5 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPGS2Q68CL5 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.78■□□□□ 0.12
TPGS2Q68CL5 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TPGS2Q68CL5 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPGS2Q68CL5 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.78■□□□□ 0.12
TPGS2Q68CL5 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPGS2Q68CL5 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.78■□□□□ 0.12
TPGS2Q68CL5 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPGS2Q68CL5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms