Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AC012508.2-201ENST00000567613 1472 ntBASIC17.45■□□□□ 0.38
USH1GQ495M9 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USH1GQ495M9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
USH1GQ495M9 KRT8P44-201ENST00000441609 1350 ntBASIC17.45■□□□□ 0.38
USH1GQ495M9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USH1GQ495M9 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USH1GQ495M9 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
USH1GQ495M9 CD8B2-202ENST00000417670 633 ntBASIC17.45■□□□□ 0.38
USH1GQ495M9 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.45■□□□□ 0.38
USH1GQ495M9 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
USH1GQ495M9 FAM8A4P-201ENST00000435433 1213 ntBASIC17.45■□□□□ 0.38
USH1GQ495M9 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.45■□□□□ 0.38
USH1GQ495M9 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.45■□□□□ 0.38
USH1GQ495M9 AC026434.2-201ENST00000506094 1078 ntBASIC17.45■□□□□ 0.38
USH1GQ495M9 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.45■□□□□ 0.38
USH1GQ495M9 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.45■□□□□ 0.38
USH1GQ495M9 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.45■□□□□ 0.38
USH1GQ495M9 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.45■□□□□ 0.38
USH1GQ495M9 AP006547.1-201ENST00000563435 692 ntBASIC17.45■□□□□ 0.38
USH1GQ495M9 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.45■□□□□ 0.38
USH1GQ495M9 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
USH1GQ495M9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
USH1GQ495M9 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
USH1GQ495M9 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
USH1GQ495M9 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USH1GQ495M9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USH1GQ495M9 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.45■□□□□ 0.38
USH1GQ495M9 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
USH1GQ495M9 PPT1-215ENST00000641471 2368 ntBASIC17.45■□□□□ 0.38
USH1GQ495M9 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
USH1GQ495M9 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
USH1GQ495M9 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
USH1GQ495M9 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
USH1GQ495M9 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
USH1GQ495M9 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.44■□□□□ 0.38
USH1GQ495M9 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
USH1GQ495M9 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
USH1GQ495M9 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
USH1GQ495M9 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
USH1GQ495M9 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USH1GQ495M9 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USH1GQ495M9 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
USH1GQ495M9 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USH1GQ495M9 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
USH1GQ495M9 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
USH1GQ495M9 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USH1GQ495M9 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USH1GQ495M9 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USH1GQ495M9 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USH1GQ495M9 MIR326-201ENST00000362220 95 ntBASIC17.44■□□□□ 0.38
USH1GQ495M9 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
USH1GQ495M9 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
USH1GQ495M9 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.44■□□□□ 0.38
USH1GQ495M9 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.44■□□□□ 0.38
USH1GQ495M9 AC108725.1-201ENST00000495472 409 ntBASIC17.44■□□□□ 0.38
USH1GQ495M9 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
USH1GQ495M9 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USH1GQ495M9 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
USH1GQ495M9 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.44■□□□□ 0.38
USH1GQ495M9 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.44■□□□□ 0.38
USH1GQ495M9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.44■□□□□ 0.38
USH1GQ495M9 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
USH1GQ495M9 DUX4L47-201ENST00000566374 394 ntBASIC17.44■□□□□ 0.38
USH1GQ495M9 MIR4525-201ENST00000580000 75 ntBASIC17.44■□□□□ 0.38
USH1GQ495M9 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.44■□□□□ 0.38
USH1GQ495M9 OR10B1P-201ENST00000601666 907 ntBASIC17.44■□□□□ 0.38
USH1GQ495M9 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.44■□□□□ 0.38
USH1GQ495M9 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
USH1GQ495M9 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USH1GQ495M9 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USH1GQ495M9 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USH1GQ495M9 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USH1GQ495M9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
USH1GQ495M9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.44■□□□□ 0.38
USH1GQ495M9 AL162727.3-201ENST00000635661 2787 ntBASIC17.44■□□□□ 0.38
USH1GQ495M9 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USH1GQ495M9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.44■□□□□ 0.38
USH1GQ495M9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
USH1GQ495M9 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
USH1GQ495M9 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
USH1GQ495M9 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
USH1GQ495M9 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USH1GQ495M9 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.43■□□□□ 0.38
USH1GQ495M9 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.43■□□□□ 0.38
USH1GQ495M9 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
USH1GQ495M9 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USH1GQ495M9 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
USH1GQ495M9 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USH1GQ495M9 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
USH1GQ495M9 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.43■□□□□ 0.38
USH1GQ495M9 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.43■□□□□ 0.38
USH1GQ495M9 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
USH1GQ495M9 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.43■□□□□ 0.38
USH1GQ495M9 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USH1GQ495M9 FAM86HP-204ENST00000513466 959 ntBASIC17.43■□□□□ 0.38
USH1GQ495M9 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
USH1GQ495M9 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.43■□□□□ 0.38
USH1GQ495M9 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
USH1GQ495M9 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USH1GQ495M9 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms