Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 REXO1L4P-201ENST00000605109 1937 ntBASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 POLD2P1-201ENST00000511220 997 ntBASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 MIR3687-2-201ENST00000577708 61 ntBASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 MIR3687-1-201ENST00000614492 61 ntBASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ANKRD55Q3KP44 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 AC012508.2-201ENST00000567613 1472 ntBASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 BCAR1-209ENST00000546196 1340 ntBASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 FAM220BP-201ENST00000377689 816 ntBASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 AP000347.1-202ENST00000435868 847 ntBASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 MTDHP5-201ENST00000598980 586 ntBASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
ANKRD55Q3KP44 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 AC055811.4-201ENST00000624039 1754 ntBASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 AC023090.2-201ENST00000625182 2110 ntBASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.71□□□□□ -0.37
ANKRD55Q3KP44 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms