Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.42■□□□□ 0.22
PPP3CAQ08209 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PPP3CAQ08209 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PPP3CAQ08209 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.42■□□□□ 0.22
PPP3CAQ08209 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
PPP3CAQ08209 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PPP3CAQ08209 AC007686.3-201ENST00000619017 3487 ntBASIC16.42■□□□□ 0.22
PPP3CAQ08209 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PPP3CAQ08209 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.42■□□□□ 0.22
PPP3CAQ08209 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.42■□□□□ 0.22
PPP3CAQ08209 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PPP3CAQ08209 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
PPP3CAQ08209 MTHFR-210ENST00000641407 2387 ntBASIC16.42■□□□□ 0.22
PPP3CAQ08209 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PPP3CAQ08209 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.42■□□□□ 0.22
PPP3CAQ08209 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PPP3CAQ08209 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PPP3CAQ08209 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 AL390755.1-201ENST00000623716 2027 ntBASIC16.41■□□□□ 0.22
PPP3CAQ08209 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PPP3CAQ08209 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PPP3CAQ08209 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 AC098614.1-201ENST00000368528 745 ntBASIC16.41■□□□□ 0.22
PPP3CAQ08209 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.41■□□□□ 0.22
PPP3CAQ08209 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
PPP3CAQ08209 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.41■□□□□ 0.22
PPP3CAQ08209 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.41■□□□□ 0.22
PPP3CAQ08209 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
PPP3CAQ08209 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.41■□□□□ 0.22
PPP3CAQ08209 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PPP3CAQ08209 RN7SL752P-201ENST00000463779 287 ntBASIC16.41■□□□□ 0.22
PPP3CAQ08209 AC026434.2-201ENST00000506094 1078 ntBASIC16.41■□□□□ 0.22
PPP3CAQ08209 AC022616.1-201ENST00000518688 554 ntBASIC16.41■□□□□ 0.22
PPP3CAQ08209 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.41■□□□□ 0.22
PPP3CAQ08209 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.41■□□□□ 0.22
PPP3CAQ08209 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PPP3CAQ08209 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.41■□□□□ 0.22
PPP3CAQ08209 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.41■□□□□ 0.22
PPP3CAQ08209 LINC00552-201ENST00000625151 2579 ntBASIC16.41■□□□□ 0.22
PPP3CAQ08209 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
PPP3CAQ08209 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
PPP3CAQ08209 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.41■□□□□ 0.22
PPP3CAQ08209 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PPP3CAQ08209 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PPP3CAQ08209 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.41■□□□□ 0.22
PPP3CAQ08209 AC055811.4-201ENST00000624039 1754 ntBASIC16.41■□□□□ 0.22
PPP3CAQ08209 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PPP3CAQ08209 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PPP3CAQ08209 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP3CAQ08209 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PPP3CAQ08209 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
PPP3CAQ08209 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.4■□□□□ 0.22
PPP3CAQ08209 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PPP3CAQ08209 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.4■□□□□ 0.22
PPP3CAQ08209 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PPP3CAQ08209 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP3CAQ08209 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.4■□□□□ 0.22
PPP3CAQ08209 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP3CAQ08209 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP3CAQ08209 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PPP3CAQ08209 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PPP3CAQ08209 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PPP3CAQ08209 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PPP3CAQ08209 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP3CAQ08209 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PPP3CAQ08209 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP3CAQ08209 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP3CAQ08209 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.4■□□□□ 0.22
PPP3CAQ08209 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.4■□□□□ 0.22
PPP3CAQ08209 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PPP3CAQ08209 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.4■□□□□ 0.22
PPP3CAQ08209 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.4■□□□□ 0.22
PPP3CAQ08209 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.4■□□□□ 0.22
PPP3CAQ08209 AC009486.1-201ENST00000569860 813 ntBASIC16.4■□□□□ 0.22
PPP3CAQ08209 AC027307.3-201ENST00000594262 1100 ntBASIC16.4■□□□□ 0.22
PPP3CAQ08209 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
PPP3CAQ08209 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.4■□□□□ 0.22
PPP3CAQ08209 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP3CAQ08209 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PPP3CAQ08209 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PPP3CAQ08209 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PPP3CAQ08209 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms