Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC3A1Q07837 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SLC3A1Q07837 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC3A1Q07837 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC3A1Q07837 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC3A1Q07837 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC3A1Q07837 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.82□□□□□ -0.2
SLC3A1Q07837 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SLC3A1Q07837 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC3A1Q07837 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC3A1Q07837 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SLC3A1Q07837 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SLC3A1Q07837 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
SLC3A1Q07837 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC3A1Q07837 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SLC3A1Q07837 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.82□□□□□ -0.2
SLC3A1Q07837 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.82□□□□□ -0.2
SLC3A1Q07837 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.82□□□□□ -0.2
SLC3A1Q07837 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.82□□□□□ -0.2
SLC3A1Q07837 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.82□□□□□ -0.2
SLC3A1Q07837 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC3A1Q07837 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC3A1Q07837 MIR6080-201ENST00000617359 66 ntBASIC13.82□□□□□ -0.2
SLC3A1Q07837 Z92544.3-201ENST00000624747 417 ntBASIC13.82□□□□□ -0.2
SLC3A1Q07837 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC3A1Q07837 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SLC3A1Q07837 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.82□□□□□ -0.2
SLC3A1Q07837 TUBB3P1-201ENST00000405796 1332 ntBASIC13.82□□□□□ -0.2
SLC3A1Q07837 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.82□□□□□ -0.2
SLC3A1Q07837 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SLC3A1Q07837 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SLC3A1Q07837 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SLC3A1Q07837 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.82□□□□□ -0.2
SLC3A1Q07837 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SLC3A1Q07837 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.82□□□□□ -0.2
SLC3A1Q07837 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC3A1Q07837 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.81□□□□□ -0.2
SLC3A1Q07837 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 FAM220BP-201ENST00000377689 816 ntBASIC13.81□□□□□ -0.2
SLC3A1Q07837 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 AL353705.2-201ENST00000428243 662 ntBASIC13.81□□□□□ -0.2
SLC3A1Q07837 AL139010.1-201ENST00000454878 894 ntBASIC13.81□□□□□ -0.2
SLC3A1Q07837 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 HNRNPUP1-201ENST00000554987 333 ntBASIC13.81□□□□□ -0.2
SLC3A1Q07837 RARRES2P9-201ENST00000565168 469 ntBASIC13.81□□□□□ -0.2
SLC3A1Q07837 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 AC097359.3-201ENST00000603982 1210 ntBASIC13.81□□□□□ -0.2
SLC3A1Q07837 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.81□□□□□ -0.2
SLC3A1Q07837 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.81□□□□□ -0.2
SLC3A1Q07837 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC3A1Q07837 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC3A1Q07837 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC3A1Q07837 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms